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Every fifth published metagenome is not available to science
Eckert, E. M., Di Cesare, A., Fontaneto, D., Berendonk, T. U., Bürgmann, H., Cytryn, E., … Corno, G. (2020). Every fifth published metagenome is not available to science. PLoS Biology, 18(4), e3000698 (7 pp.). https://doi.org/10.1371/journal.pbio.3000698
Environmental and microbial interactions shape methane-oxidizing bacterial communities in a stratified lake
Guggenheim, C., Freimann, R., Mayr, M. J., Beck, K., Wehrli, B., & Bürgmann, H. (2020). Environmental and microbial interactions shape methane-oxidizing bacterial communities in a stratified lake. Frontiers in Microbiology, 11. https://doi.org/10.3389/fmicb.2020.579427
A global multinational survey of cefotaxime-resistant coliforms in urban wastewater treatment plants
Marano, R. B. M., Fernandes, T., Manaia, C. M., Nunes, O., Morrison, D., Berendonk, T. U., … Cytryn, E. (2020). A global multinational survey of cefotaxime-resistant coliforms in urban wastewater treatment plants. Environment International, 144, 106035 (11 pp.). https://doi.org/10.1016/j.envint.2020.106035
Growth and rapid succession of methanotrophs effectively limit methane release during lake overturn
Mayr, M. J., Zimmermann, M., Dey, J., Brand, A., Wehrli, B., & Bürgmann, H. (2020). Growth and rapid succession of methanotrophs effectively limit methane release during lake overturn. Communications Biology, 3, 108 (9 pp.). https://doi.org/10.1038/s42003-020-0838-z
Lake mixing regime selects apparent methane oxidation kinetics of the methanotroph assemblage
Mayr, M. J., Zimmermann, M., Dey, J., Wehrli, B., & Bürgmann, H. (2020). Lake mixing regime selects apparent methane oxidation kinetics of the methanotroph assemblage. Biogeosciences, 17(16), 4247-4259. https://doi.org/10.5194/bg-17-4247-2020
Niche partitioning of methane-oxidizing bacteria along the oxygen–methane counter gradient of stratified lakes
Mayr, M. J., Zimmermann, M., Guggenheim, C., Brand, A., & Bürgmann, H. (2020). Niche partitioning of methane-oxidizing bacteria along the oxygen–methane counter gradient of stratified lakes. ISME Journal, 14, 274-287. https://doi.org/10.1038/s41396-019-0515-8
Aerobic methane oxidation under copper scarcity in a stratified lake
Guggenheim, C., Brand, A., Bürgmann, H., Sigg, L., & Wehrli, B. (2019). Aerobic methane oxidation under copper scarcity in a stratified lake. Scientific Reports, 9, 4817 (11 pp.). https://doi.org/10.1038/s41598-019-40642-2
Wastewater treatment plant resistomes are shaped by bacterial composition, genetic exchange, and upregulated expression in the effluent microbiomes
Ju, F., Beck, K., Yin, X., Maccagnan, A., McArdell, C. S., Singer, H. P., … Bürgmann, H. (2019). Wastewater treatment plant resistomes are shaped by bacterial composition, genetic exchange, and upregulated expression in the effluent microbiomes. ISME Journal, 13(2), 346-360. https://doi.org/10.1038/s41396-018-0277-8
Predator-induced changes in dissolved organic carbon dynamics
Limberger, R., Birtel, J., Peter, H., Catalán, N., da Silva Farias, D., Best, R. J., … Matthews, B. (2019). Predator-induced changes in dissolved organic carbon dynamics. Oikos, 128(3), 430-440. https://doi.org/10.1111/oik.05673
New insight into effect of antibiotics concentration and process configuration on the removal of antibiotics and relevant antibiotic resistance genes
Yang, L., Wen, Q., Zhao, Y., Chen, Z., Wang, Q., & Bürgmann, H. (2019). New insight into effect of antibiotics concentration and process configuration on the removal of antibiotics and relevant antibiotic resistance genes. Journal of Hazardous Materials, 373, 60-66. https://doi.org/10.1016/j.jhazmat.2019.03.060
Water and sanitation: an essential battlefront in the war on antimicrobial resistance
Bürgmann, H., Frigon, D., Gaze, W., Manaia, C., Pruden, A., Singer, A. C., … Zhang, T. (2018). Water and sanitation: an essential battlefront in the war on antimicrobial resistance. FEMS Microbiology Ecology, 94(9), fiy101 (14 pp.). https://doi.org/10.1093/femsec/fiy101
Swiss antibiotic resistance report 2018. Usage of antibiotics and occurrence of antibiotic resistance in bacteria from humans and animals in Switzerland
Heim, D., Kronenberg, A., Overesch, G., Plüss-Suard, C., Schüpbach, G., Bless, P., … Zimmermann-Steffens, S. (2018). Swiss antibiotic resistance report 2018. Usage of antibiotics and occurrence of antibiotic resistance in bacteria from humans and animals in Switzerland. (Report No.: 2018-OEG-87). Federal Office of Public Health.
A historical legacy of antibiotic utilization on bacterial seed banks in sediments
Madueño, L., Paul, C., Junier, T., Bayrychenko, Z., Filippidou, S., Beck, K., … Junier, P. (2018). A historical legacy of antibiotic utilization on bacterial seed banks in sediments. PeerJ, 6, e4197 (19 pp.). https://doi.org/10.7717/peerj.4197
Dissemination of antibiotic resistance genes associated with the sporobiota in sediments impacted by wastewater
Paul, C., Bayrychenko, Z., Junier, T., Filippidou, S., Beck, K., Bueche, M., … Junier, P. (2018). Dissemination of antibiotic resistance genes associated with the sporobiota in sediments impacted by wastewater. PeerJ, 6, e4989 (24 pp.). https://doi.org/10.7717/peerj.4989
Phylogenetic clustering of small low nucleic acid-content bacteria across diverse freshwater ecosystems
Proctor, C. R., Besmer, M. D., Langenegger, T., Beck, K., Walser, J. C., Ackermann, M., … Hammes, F. (2018). Phylogenetic clustering of small low nucleic acid-content bacteria across diverse freshwater ecosystems. ISME Journal, 12, 1344-1359. https://doi.org/10.1038/s41396-018-0070-8
Antibiotikaresistenzen im Trinkwasser?
Bürgmann, H., & Imminger, S. (2017). Antibiotikaresistenzen im Trinkwasser? Aqua & Gas, 97(10), 60-66.
Growth of <i>Nitrosococcus</i>-related ammonia oxidizing bacteria coincides with extremely low pH values in wastewater with high ammonia content
Fumasoli, A., Bürgmann, H., Weissbrodt, D. G., Wells, G. F., Beck, K., Mohn, J., … Udert, K. M. (2017). Growth of Nitrosococcus-related ammonia oxidizing bacteria coincides with extremely low pH values in wastewater with high ammonia content. Environmental Science and Technology, 51(12), 6857-6866. https://doi.org/10.1021/acs.est.7b00392
Strong impact of anthropogenic contamination on the co-occurrence patterns of a riverine microbial community
Hu, A., Ju, F., Hou, L., Li, J., Yang, X., Wang, H., … Yu, C. P. (2017). Strong impact of anthropogenic contamination on the co-occurrence patterns of a riverine microbial community. Environmental Microbiology, 19(12), 4993-5009. https://doi.org/10.1111/1462-2920.13942
Bacteria-induced mixing in natural waters
Sommer, T., Danza, F., Berg, J., Sengupta, A., Constantinescu, G., Tokyay, T., … Wüest, A. (2017). Bacteria-induced mixing in natural waters. Geophysical Research Letters, 44(18), 9424-9432. https://doi.org/10.1002/2017GL074868
Einfluss von Mikroverunreinigungen
Stamm, C., Burdon, F., Fischer, S., Kienle, C., Munz, N., Tlili, A., … Eggen, R. (2017). Einfluss von Mikroverunreinigungen. Aqua & Gas, 97(6), 90-95.
 

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