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Microbial nitrogen transformation potential in sediments of two contrasting lakes is spatially structured but seasonally stable
Baumann, K. B. L., Thoma, R., Callbeck, C. M., Niederdorfer, R., Schubert, C. J., Müller, B., … Bürgmann, H. (2022). Microbial nitrogen transformation potential in sediments of two contrasting lakes is spatially structured but seasonally stable. mSphere, 7(1), e01013-21 (20 pp.). https://doi.org/10.1128/msphere.01013-21
Local conditions structure unique archaeal communities in the anoxic sediments of meromictic Lake Kivu
Bhattarai, S., Ross, K. A., Schmid, M., Anselmetti, F. S., & Bürgmann, H. (2012). Local conditions structure unique archaeal communities in the anoxic sediments of meromictic Lake Kivu. Microbial Ecology, 64(2), 291-310. https://doi.org/10.1007/s00248-012-0034-x
Estimating bacterial diversity for ecological studies: methods, metrics, and assumptions
Birtel, J., Walser, J. C., Pichon, S., Bürgmann, H., & Matthews, B. (2015). Estimating bacterial diversity for ecological studies: methods, metrics, and assumptions. PLoS One, 10(4), e0125356 (23 pp.). https://doi.org/10.1371/journal.pone.0125356
Simple absolute quantification method correcting for quantitative PCR efficiency variations for microbial community samples
Brankatschk, R., Bodenhausen, N., Zeyer, J., & Bürgmann, H. (2012). Simple absolute quantification method correcting for quantitative PCR efficiency variations for microbial community samples. Applied and Environmental Microbiology, 78(12), 4481-4489. https://doi.org/10.1128/AEM.07878-11
Response of sediment microbial community structure in a freshwater reservoir to manipulations in oxygen availability
Bryant, L. D., Little, J. C., & Bürgmann, H. (2012). Response of sediment microbial community structure in a freshwater reservoir to manipulations in oxygen availability. FEMS Microbiology Ecology, 80(1), 248-263. https://doi.org/10.1111/j.1574-6941.2011.01290.x
Evaluation und Optimierung einer Methode zur Beurteilung der Antibiotikaresistenz in Gewässern
Bürgmann, H., Czekalski, N., & Egli, A. (2013). Evaluation und Optimierung einer Methode zur Beurteilung der Antibiotikaresistenz in Gewässern. Eawag.
Antibiotikaresistenz bei Wasserbakterien. Sind nur grosse resistent? Durchflusszytometrie verknüpft mit Molekularbiologie gibt Aufschluss
Bürgmann, H., Lee, J., & Erb, S. (2022). Antibiotikaresistenz bei Wasserbakterien. Sind nur grosse resistent? Durchflusszytometrie verknüpft mit Molekularbiologie gibt Aufschluss. Aqua & Gas, 102(7-8), 42-48.
Antibiotikaresistenzen im Trinkwasser?
Bürgmann, H., & Imminger, S. (2017). Antibiotikaresistenzen im Trinkwasser? Aqua & Gas, 97(10), 60-66.
Eintrag von Antibiotika und Antibiotikaresistenzen in Wassersysteme der Schweiz
Bürgmann, H. (2014). Eintrag von Antibiotika und Antibiotikaresistenzen in Wassersysteme der Schweiz. Prävention und Gesundheitsforderung, 9(3), 185-190. https://doi.org/10.1007/s11553-014-0444-3
Water and sanitation: an essential battlefront in the war on antimicrobial resistance
Bürgmann, H., Frigon, D., Gaze, W., Manaia, C., Pruden, A., Singer, A. C., … Zhang, T. (2018). Water and sanitation: an essential battlefront in the war on antimicrobial resistance. FEMS Microbiology Ecology, 94(9), fiy101 (14 pp.). https://doi.org/10.1093/femsec/fiy101
A brief multi-disciplinary review on antimicrobial resistance in medicine and its linkage to the global environmental microbiota
Cantas, L., Shah, S. Q. A., Cavaco, L. M., Manaia, C. M., Walsh, F., Popowska, M., … Sørum, H. (2013). A brief multi-disciplinary review on antimicrobial resistance in medicine and its linkage to the global environmental microbiota. Frontiers in Microbiology, 4, 96 (14 pp.). https://doi.org/10.3389/fmicb.2013.00096
Antibiotikaresistenzen im Wasserkreislauf. Ein Überblick über die Situation in der Schweiz
Czekalski, N., von Gunten, U., & Bürgmann, H. (2016). Antibiotikaresistenzen im Wasserkreislauf. Ein Überblick über die Situation in der Schweiz. Aqua & Gas, 96(9), 72-80.
Increased levels of multiresistant bacteria and resistance genes after wastewate treatment and their dissemination into Lake Geneva, Switzerland
Czekalski, N., Berthold, T., Caucci, S., Egli, A., & Bürgmann, H. (2012). Increased levels of multiresistant bacteria and resistance genes after wastewate treatment and their dissemination into Lake Geneva, Switzerland. Frontiers in Microbiology, 3, 106 (18 pp.). https://doi.org/10.3389/fmicb.2012.00106
Wastewater as a point source of antibiotic-resistance genes in the sediment of a freshwater lake
Czekalski, N., Díez, E. G., & Bürgmann, H. (2014). Wastewater as a point source of antibiotic-resistance genes in the sediment of a freshwater lake. ISME Journal, 8(7), 1381-1390. https://doi.org/10.1038/ismej.2014.8
Inactivation of antibiotic resistant bacteria and resistance genes by ozone: from laboratory experiments to full-scale wastewater treatment
Czekalski, N., Imminger, S., Salhi, E., Veljkovic, M., Kleffel, K., Drissner, D., … Von Gunten, U. (2016). Inactivation of antibiotic resistant bacteria and resistance genes by ozone: from laboratory experiments to full-scale wastewater treatment. Environmental Science and Technology, 50(21), 11862-11871. https://doi.org/10.1021/acs.est.6b02640
Long-read metagenomic sequencing reveals shifts in associations of antibiotic resistance genes with mobile genetic elements from sewage to activated sludge
Dai, D., Brown, C., Bürgmann, H., Larsson, D. G. J., Nambi, I., Zhang, T., … Vikesland, P. J. (2022). Long-read metagenomic sequencing reveals shifts in associations of antibiotic resistance genes with mobile genetic elements from sewage to activated sludge. Microbiome, 10(1), 20 (16 pp.). https://doi.org/10.1186/s40168-021-01216-5
High diversity of diazotrophs in the forefield of a receding alpine glacier
Duc, L., Noll, M., Meier, B. E., Bürgmann, H., & Zeyer, J. (2009). High diversity of diazotrophs in the forefield of a receding alpine glacier. Microbial Ecology, 57(1), 179-190. https://doi.org/10.1007/s00248-008-9408-5
Every fifth published metagenome is not available to science
Eckert, E. M., Di Cesare, A., Fontaneto, D., Berendonk, T. U., Bürgmann, H., Cytryn, E., … Corno, G. (2020). Every fifth published metagenome is not available to science. PLoS Biology, 18(4), e3000698 (7 pp.). https://doi.org/10.1371/journal.pbio.3000698
Hydrodynamic regimes modulate nitrogen fixation and the mode of diazotrophy in Lake Tanganyika
Ehrenfels, B., Baumann, K. B. L., Niederdorfer, R., Mbonde, A. S., Kimirei, I. A., Kuhn, T., … Callbeck, C. M. (2023). Hydrodynamic regimes modulate nitrogen fixation and the mode of diazotrophy in Lake Tanganyika. Nature Communications, 14, 6591 (13 pp.). https://doi.org/10.1038/s41467-023-42391-3
Hydrologic linkages drive spatial structuring of bacterial assemblages and functioning in alpine floodplains
Freimann, R., Bürgmann, H., Findlay, S. E. G., & Robinson, C. T. (2015). Hydrologic linkages drive spatial structuring of bacterial assemblages and functioning in alpine floodplains. Frontiers in Microbiology, 6, 1221 (15 pp.). https://doi.org/10.3389/fmicb.2015.01221