| High-throughput sequencing of faeces provides evidence for dispersal of parasites and pathogens by migratory waterbirds
Briscoe, A. G., Nichols, S., Hartikainen, H., Knipe, H., Foster, R., Green, A. J., … Bass, D. (2021). High-throughput sequencing of faeces provides evidence for dispersal of parasites and pathogens by migratory waterbirds. Molecular Ecology Resources, 22(4), 1303-1318. https://doi.org/10.1111/1755-0998.13548 |
| Gene duplication and gain in the trematode <em>Atriophallophorus</em> <em>winterbourni</em> contributes to adaptation to parasitism
Zajac, N., Zoller, S., Seppälä, K., Moi, D., Dessimoz, C., Jokela, J., … Glover, N. (2021). Gene duplication and gain in the trematode Atriophallophorus winterbourni contributes to adaptation to parasitism. Genome Biology and Evolution, 13(3), evab010 (16 pp.). https://doi.org/10.1093/gbe/evab010 |
| Detection of aquatic wildlife pathogens from eDNA in water samples. Validation and application in Switzerland
Sieber, N. M. (2020). Detection of aquatic wildlife pathogens from eDNA in water samples. Validation and application in Switzerland [Doctoral dissertation, ETH Zurich]. https://doi.org/10.3929/ethz-b-000469792 |
| Validation of an eDNA-based method for the detection of wildlife pathogens in water
Sieber, N., Hartikainen, H., & Vorburger, C. (2020). Validation of an eDNA-based method for the detection of wildlife pathogens in water. Diseases of Aquatic Organisms, 141, 171-184. https://doi.org/10.3354/dao03524 |
| Effects of parasite concentrations on infection dynamics and proliferative kidney disease pathogenesis in brown trout (<em>Salmo trutta</em>)
Strepparava, N., Ros, A., Hartikainen, H., Schmidt-Posthaus, H., Wahli, T., Segner, H., & Bailey, C. (2020). Effects of parasite concentrations on infection dynamics and proliferative kidney disease pathogenesis in brown trout (Salmo trutta). Transboundary and Emerging Diseases, 67(6), 2642-2652. https://doi.org/10.1111/tbed.13615 |
| Waterbird-mediated dispersal and freshwater biodiversity: general insights from bryozoans
Okamura, B., Hartikainen, H., & Trew, J. (2019). Waterbird-mediated dispersal and freshwater biodiversity: general insights from bryozoans. Frontiers in Ecology and Evolution, 7, 29 (9 pp.). https://doi.org/10.3389/fevo.2019.00029 |
| Estimating species distribution and abundance in river networks using environmental DNA
Carraro, L., Hartikainen, H., Jokela, J., Bertuzzo, E., & Rinaldo, A. (2018). Estimating species distribution and abundance in river networks using environmental DNA. Proceedings of the National Academy of Sciences of the United States of America PNAS, 115(46), 11724-11729. https://doi.org/10.1073/pnas.1813843115 |
| Temperature-related parasite infection dynamics: the case of proliferative kidney disease of brown trout
Strepparava, N., Segner, H., Ros, A., Hartikainen, H., Schmidt-Posthaus, H., & Wahli, T. (2018). Temperature-related parasite infection dynamics: the case of proliferative kidney disease of brown trout. Parasitology, 145(3), 281-291. https://doi.org/10.1017/S0031182017001482 |
| Integrated field, laboratory, and theoretical study of PKD spread in a Swiss prealpine river
Carraro, L., Bertuzzo, E., Mari, L., Fontes, I., Hartikainen, H., Strepparava, N., … Rinaldo, A. (2017). Integrated field, laboratory, and theoretical study of PKD spread in a Swiss prealpine river. Proceedings of the National Academy of Sciences of the United States of America PNAS, 114(45), 11992-11997. https://doi.org/10.1073/pnas.1713691114 |
| Conditional persistence and tolerance characterize endoparasite–colonial host interactions
Fontes, I., Hartikainen, H., Taylor, N. G. H., & Okamura, B. (2017). Conditional persistence and tolerance characterize endoparasite–colonial host interactions. Parasitology, 144(8), 1052-1063. https://doi.org/10.1017/S0031182017000269 |
| Persistence, impacts and environmental drivers of covert infections in invertebrate hosts
Fontes, I., Hartikainen, H., Williams, C., & Okamura, B. (2017). Persistence, impacts and environmental drivers of covert infections in invertebrate hosts. Parasites and Vectors, 10(1), 542 (15 pp.). https://doi.org/10.1186/s13071-017-2495-8 |
| Tetracapsuloides bryosalmonae abundance in river water
Fontes, I., Hartikainen, H., Holland, J. W., Secombes, C. J., & Okamura, B. (2017). Tetracapsuloides bryosalmonae abundance in river water. Diseases of Aquatic Organisms, 124(2), 145-157. https://doi.org/10.3354/dao03116 |
| Influence of wastewater treatment plants on Tetracapsuloides bryosalmonae presence and concentration in water samples
Rossbacher, S. (2017). Influence of wastewater treatment plants on Tetracapsuloides bryosalmonae presence and concentration in water samples [Bachelor thesis]. |
| An epidemiological model for proliferative kidney disease in salmonid populations
Carraro, L., Mari, L., Hartikainen, H., Strepparava, N., Wahli, T., Jokela, J., … Bertuzzo, E. (2016). An epidemiological model for proliferative kidney disease in salmonid populations. Parasites and Vectors, 9, 487 (16 pp.). https://doi.org/10.1186/s13071-016-1759-z |
| Protistan community analysis: key findings of a large-scale molecular sampling
Grossmann, L., Jensen, M., Heider, D., Jost, S., Glücksman, E., Hartikainen, H., … Boenigk, J. (2016). Protistan community analysis: key findings of a large-scale molecular sampling. ISME Journal, 10, 2269-2279. https://doi.org/10.1038/ismej.2016.10 |
| Effects of effluent on the freshwater bryozoan <em>Fredericella sultana</em> and implications for the spread of Proliferative Kidney Disease in salmonid fish
Guillebeau, M. (2016). Effects of effluent on the freshwater bryozoan Fredericella sultana and implications for the spread of Proliferative Kidney Disease in salmonid fish [Master thesis]. |
| Assessing myxozoan presence and diversity using environmental DNA
Hartikainen, H., Bass, D., Briscoe, A. G., Knipe, H., Green, A. J., & Okamura, B. (2016). Assessing myxozoan presence and diversity using environmental DNA. International Journal for Parasitology, 46, 781-792. https://doi.org/10.1016/j.ijpara.2016.07.006 |
| Bryozoan stable carbon and hydrogen isotopes: relationships between the isotopic composition of zooids, statoblasts and lake water
van Hardenbroek, M., Leuenberger, M., Hartikainen, H., Okamura, B., & Heiri, O. (2016). Bryozoan stable carbon and hydrogen isotopes: relationships between the isotopic composition of zooids, statoblasts and lake water. Hydrobiologia, 765(1), 209-223. https://doi.org/10.1007/s10750-015-2414-y |
| Diverse applications of environmental DNA methods in parasitology
Bass, D., Stentiford, G. D., Littlewood, D. T. J., & Hartikainen, H. (2015). Diverse applications of environmental DNA methods in parasitology. Trends in Parasitology, 31(10), 499-513. https://doi.org/10.1016/j.pt.2015.06.013 |
| Myxozoan life cycles: Practical approaches and insights
Eszterbauer, E., Atkinson, S., Diamant, A., Morris, D., El-Matbouli, M., & Hartikainen, H. (2015). Myxozoan life cycles: Practical approaches and insights. In B. Okamura, A. Gruhl, & J. L. Bartholomew (Eds.), Myxozoan Evolution, Ecology and Development (pp. 175-198). https://doi.org/10.1007/978-3-319-14753-6_10 |
