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The effect of anthropogenic and environmental factors in coupled human‐natural systems: evidence from Lake Zürich
Baggio, M., Chavas, J. ‐P., Di Falco, S., Hertig, A., & Pomati, F. (2020). The effect of anthropogenic and environmental factors in coupled human‐natural systems: evidence from Lake Zürich. Natural Resource Modeling, 33, e12245 (28 pp.). https://doi.org/10.1111/nrm.12245
Second-order phase transition in phytoplankton trait dynamics
Held, J., Lorimer, T., Pomati, F., Stoop, R., & Albert, C. (2020). Second-order phase transition in phytoplankton trait dynamics. Chaos: An Interdisciplinary Journal of Nonlinear Science, 30(5), 053109 (9 pp.). https://doi.org/10.1063/1.5141755
A global database for metacommunity ecology, integrating species, traits, environment and space
Jeliazkov, A., Mijatovic, D., Chantepie, S., Andrew, N., Arlettaz, R., Barbaro, L., … Chase, J. M. (2020). A global database for metacommunity ecology, integrating species, traits, environment and space. Scientific Data, 7(1), 6 (15 pp.). https://doi.org/10.1038/s41597-019-0344-7
A brief guide for the measurement and interpretation of microbial functional diversity
Johnson, D. R., & Pomati, F. (2020). A brief guide for the measurement and interpretation of microbial functional diversity. Environmental Microbiology, 22(8), 3039-3048. https://doi.org/10.1111/1462-2920.15147
On biological evolution and environmental solutions
Matthews, B., Jokela, J., Narwani, A., Räsänen, K., Pomati, F., Altermatt, F., … Vorburger, C. (2020). On biological evolution and environmental solutions. Science of the Total Environment, 724, 138194 (7 pp.). https://doi.org/10.1016/j.scitotenv.2020.138194
Interacting temperature, nutrients and zooplankton grazing control phytoplankton size-abundance relationships in eight Swiss Lakes
Pomati, F., Shurin, J. B., Andersen, K. H., Tellenbach, C., & Barton, A. D. (2020). Interacting temperature, nutrients and zooplankton grazing control phytoplankton size-abundance relationships in eight Swiss Lakes. Frontiers in Microbiology, 10, 3155 (17 pp.). https://doi.org/10.3389/fmicb.2019.03155
Storm impacts on phytoplankton community dynamics in lakes
Stockwell, J. D., Doubek, J. P., Adrian, R., Anneville, O., Carey, C. C., Carvalho, L., … Wilson, H. L. (2020). Storm impacts on phytoplankton community dynamics in lakes. Global Change Biology, 26(5), 2756-2784. https://doi.org/10.1111/gcb.15033
A single pulse of diffuse contaminants alters the size distribution of natural phytoplankton communities
Baho, D. L., Pomati, F., Leu, E., Hessen, D. O., Moe, S. J., Norberg, J., & Nizzetto, L. (2019). A single pulse of diffuse contaminants alters the size distribution of natural phytoplankton communities. Science of the Total Environment, 683, 578-588. https://doi.org/10.1016/j.scitotenv.2019.05.229
Resilience of natural phytoplankton communities to pulse disturbances from micropollutant exposure and vertical mixing
Baho, D. L., Leu, E., Pomati, F., Hessen, D. O., Norberg, J., Moe, S. J., … Nizzetto, L. (2019). Resilience of natural phytoplankton communities to pulse disturbances from micropollutant exposure and vertical mixing. Environmental Toxicology and Chemistry, 38(10), 2197-2208. https://doi.org/10.1002/etc.4536
Light limitation increases multidimensional trait evenness in phytoplankton populations
Fontana, S., Thomas, M. K., Reyes, M., & Pomati, F. (2019). Light limitation increases multidimensional trait evenness in phytoplankton populations. ISME Journal, 13, 1159-1167. https://doi.org/10.1038/s41396-018-0320-9
High dispersal levels and lake warming are emergent drivers of cyanobacterial community assembly in peri-Alpine lakes
Monchamp, M. E., Spaak, P., & Pomati, F. (2019). High dispersal levels and lake warming are emergent drivers of cyanobacterial community assembly in peri-Alpine lakes. Scientific Reports, 9, 7366 (8 pp.). https://doi.org/10.1038/s41598-019-43814-2
Long term diversity and distribution of non-photosynthetic cyanobacteria in peri-Alpine lakes
Monchamp, M. E., Spaak, P., & Pomati, F. (2019). Long term diversity and distribution of non-photosynthetic cyanobacteria in peri-Alpine lakes. Frontiers in Microbiology, 9, 3344 (11 pp.). https://doi.org/10.3389/fmicb.2018.03344
Biodiversity drives micropollutant biotransformation in freshwater phytoplankton assemblages
Stravs, M. A., Pomati, F., & Hollender, J. (2019). Biodiversity drives micropollutant biotransformation in freshwater phytoplankton assemblages. Environmental Science and Technology, 53(8), 4265-4273. https://doi.org/10.1021/acs.est.8b07018
BioTIME: a database of biodiversity time series for the Anthropocene
Dornelas, M., Antão, L. H., Moyes, F., Bates, A. E., Magurran, A. E., Adam, D., … Zettler, M. L. (2018). BioTIME: a database of biodiversity time series for the Anthropocene. Global Ecology and Biogeography, 27(7), 760-786. https://doi.org/10.1111/geb.12729
Individual-level trait diversity predicts phytoplankton community properties better than species richness or evenness
Fontana, S., Thomas, M. K., Moldoveanu, M., Spaak, P., & Pomati, F. (2018). Individual-level trait diversity predicts phytoplankton community properties better than species richness or evenness. ISME Journal, 12, 356-366. https://doi.org/10.1038/ismej.2017.160
Seasonal dynamics of glyphosate and AMPA in Lake Greifensee: rapid microbial degradation in the epilimnion during summer
Huntscha, S., Stravs, M. A., Bühlmann, A., Ahrens, C. H., Frey, J. E., Pomati, F., … Poiger, T. (2018). Seasonal dynamics of glyphosate and AMPA in Lake Greifensee: rapid microbial degradation in the epilimnion during summer. Environmental Science and Technology, 52(8), 4641-4649. https://doi.org/10.1021/acs.est.8b00314
Homogenization of lake cyanobacterial communities over a century of climate change and eutrophication
Monchamp, M. E., Spaak, P., Domaizon, I., Dubois, N., Bouffard, D., & Pomati, F. (2018). Homogenization of lake cyanobacterial communities over a century of climate change and eutrophication. Nature Ecology & Evolution, 2, 317-324. https://doi.org/10.1038/s41559-017-0407-0
Quantifying cell densities and biovolumes of phytoplankton communities and functional groups using scanning flow cytometry, machine learning and unsupervised clustering
Thomas, M. K., Fontana, S., Reyes, M., & Pomati, F. (2018). Quantifying cell densities and biovolumes of phytoplankton communities and functional groups using scanning flow cytometry, machine learning and unsupervised clustering. PLoS One, 13(5), e0196225 (22 pp.). https://doi.org/10.1371/journal.pone.0196225
The predictability of a lake phytoplankton community, over time-scales of hours to years
Thomas, M. K., Fontana, S., Reyes, M., Kehoe, M., & Pomati, F. (2018). The predictability of a lake phytoplankton community, over time-scales of hours to years. Ecology Letters, 21(5), 619-628. https://doi.org/10.1111/ele.12927
Sedimentary DNA reveals centuries of hidden diversity in lake cyanobacterial communities
Monchamp, M. E. (2017). Sedimentary DNA reveals centuries of hidden diversity in lake cyanobacterial communities [Doctoral dissertation, ETH Zurich]. https://doi.org/10.3929/ethz-b-000166606