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Deep learning classification of Lake Zooplankton
Kyathanahally, S. P., Hardeman, T., Merz, E., Bulas, T., Reyes, M., Isles, P., … Baity-Jesi, M. (2021). Deep learning classification of Lake Zooplankton. Frontiers in Microbiology, 12, 746297 (13 pp.). https://doi.org/10.3389/fmicb.2021.746297
Underwater dual-magnification imaging for automated lake plankton monitoring
Merz, E., Kozakiewicz, T., Reyes, M., Ebi, C., Isles, P., Baity-Jesi, M., … Pomati, F. (2021). Underwater dual-magnification imaging for automated lake plankton monitoring. Water Research, 203, 117524 (12 pp.). https://doi.org/10.1016/j.watres.2021.117524
Stream microbial communities and ecosystem functioning show complex responses to multiple stressors in wastewater
Burdon, F. J., Bai, Y., Reyes, M., Tamminen, M., Staudacher, P., Mangold, S., … Stamm, C. (2020). Stream microbial communities and ecosystem functioning show complex responses to multiple stressors in wastewater. Global Change Biology, 26(11), 6363-6382. https://doi.org/10.1111/gcb.15302
Early-career coordinated distributed experiments: empowerment through collaboration
Pastor, A., Hernández-del Amo, E., Giménez-Grau, P., Fillol, M., Pereda, O., Flores, L., … Catalán, N. (2020). Early-career coordinated distributed experiments: empowerment through collaboration. Frontiers in Education, 5, 13 (7 pp.). https://doi.org/10.3389/feduc.2020.00013
Agriculture versus wastewater pollution as drivers of macroinvertebrate community structure in streams
Burdon, F. J., Munz, N. A., Reyes, M., Focks, A., Joss, A., Räsänen, K., … Stamm, C. (2019). Agriculture versus wastewater pollution as drivers of macroinvertebrate community structure in streams. Science of the Total Environment, 659, 1256-1265. https://doi.org/10.1016/j.scitotenv.2018.12.372
Light limitation increases multidimensional trait evenness in phytoplankton populations
Fontana, S., Thomas, M. K., Reyes, M., & Pomati, F. (2019). Light limitation increases multidimensional trait evenness in phytoplankton populations. ISME Journal, 13, 1159-1167. https://doi.org/10.1038/s41396-018-0320-9
Interactive effects of foundation species on ecosystem functioning and stability in response to disturbance
Narwani, A., Reyes, M., Pereira, A. L., Penson, H., Dennis, S. R., Derrer, S., … Matthews, B. (2019). Interactive effects of foundation species on ecosystem functioning and stability in response to disturbance. Proceedings of the Royal Society B: Biological Sciences, 286(1913), 20191857 (10 pp.). https://doi.org/10.1098/rspb.2019.1857
Behind the scenes: mechanisms regulating climatic patterns of dissolved organic carbon uptake in headwater streams
Catalán, N., Casas-Ruiz, J. P., Arce, M. I., Abril, M., Bravo, A. G., del Campo, R., … Pastor, A. (2018). Behind the scenes: mechanisms regulating climatic patterns of dissolved organic carbon uptake in headwater streams. Global Biogeochemical Cycles, 32(10), 1528-1541. https://doi.org/10.1029/2018GB005919
Quantifying cell densities and biovolumes of phytoplankton communities and functional groups using scanning flow cytometry, machine learning and unsupervised clustering
Thomas, M. K., Fontana, S., Reyes, M., & Pomati, F. (2018). Quantifying cell densities and biovolumes of phytoplankton communities and functional groups using scanning flow cytometry, machine learning and unsupervised clustering. PLoS One, 13(5), e0196225 (22 pp.). https://doi.org/10.1371/journal.pone.0196225
The predictability of a lake phytoplankton community, over time-scales of hours to years
Thomas, M. K., Fontana, S., Reyes, M., Kehoe, M., & Pomati, F. (2018). The predictability of a lake phytoplankton community, over time-scales of hours to years. Ecology Letters, 21(5), 619-628. https://doi.org/10.1111/ele.12927
Pesticides drive risk of micropollutants in wastewater-impacted streams during low flow conditions
Munz, N. A., Burdon, F. J., de Zwart, D., Junghans, M., Melo, L., Reyes, M., … Stamm, C. (2017). Pesticides drive risk of micropollutants in wastewater-impacted streams during low flow conditions. Water Research, 110, 366-377. https://doi.org/10.1016/j.watres.2016.11.001
Local and regional drivers of headwater streams metabolism: insights from the first AIL collaborative project
Pastor, A., Lupon, A., Gómez-Gener, L., Rodríguez-Castillo, T., Abril, M., Arce, M. I., … Catalán, N. (2017). Local and regional drivers of headwater streams metabolism: insights from the first AIL collaborative project. Limnetica, 36(1), 67-85. https://doi.org/10.23818/limn.36.06
Test of in situ (underwater) automated imaging, as provided by the Scripps Plankton Camera, for monitoring and analysis of lake phytoplankton
Reyes, M., Spaak, P., & Pomati, F. (2017). Test of in situ (underwater) automated imaging, as provided by the Scripps Plankton Camera, for monitoring and analysis of lake phytoplankton. Eawag.
Environmental context and magnitude of disturbance influence trait-mediated community responses to wastewater in streams
Burdon, F. J., Reyes, M., Alder, A. C., Joss, A., Ort, C., Räsänen, K., … Stamm, C. (2016). Environmental context and magnitude of disturbance influence trait-mediated community responses to wastewater in streams. Ecology and Evolution, 6(12), 3923-3939. https://doi.org/10.1002/ece3.2165
Fish population genetic structure shaped by hydroelectric power plants in the upper Rhine catchment
Gouskov, A., Reyes, M., Wirthner-Bitterlin, L., & Vorburger, C. (2016). Fish population genetic structure shaped by hydroelectric power plants in the upper Rhine catchment. Evolutionary Applications, 9(2), 394-408. https://doi.org/10.1111/eva.12339
Density constrains cascading consequences of warming and nitrogen from invertebrate growth to litter decomposition
Hines, J., Reyes, M., & Gessner, M. O. (2016). Density constrains cascading consequences of warming and nitrogen from invertebrate growth to litter decomposition. Ecology, 97(7), 1635-1642. https://doi.org/10.1002/ecy.1447
Genotypic trait variation modifies effects of climate warming and nitrogen deposition on litter mass loss and microbial respiration
Hines, J., Reyes, M., Mozder, T. J., & Gessner, M. O. (2014). Genotypic trait variation modifies effects of climate warming and nitrogen deposition on litter mass loss and microbial respiration. Global Change Biology, 20(12), 3780-3789. https://doi.org/10.1111/gcb.12704