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A modular and expandable ecosystem for metabolomics data annotation in R
Rainer, J., Vicini, A., Salzer, L., Stanstrup, J., Badia, J. M., Neumann, S., … Witting, M. (2022). A modular and expandable ecosystem for metabolomics data annotation in R. Metabolites, 12(2), 173 (13 pp.). https://doi.org/10.3390/metabo12020173
MSNovelist: de novo structure generation from mass spectra
Stravs, M. A., Dührkop, K., Böcker, S., & Zamboni, N. (2022). MSNovelist: de novo structure generation from mass spectra. Nature Methods, 19, 865-870. https://doi.org/10.1038/s41592-022-01486-3
Transportable automated HRMS platform "mS<sup>2</sup>field" enables insights into water-quality dynamics in real time
Stravs, M. A., Stamm, C., Ort, C., & Singer, H. (2021). Transportable automated HRMS platform "mS2field" enables insights into water-quality dynamics in real time. Environmental Science and Technology Letters, 8(5), 373-380. https://doi.org/10.1021/acs.estlett.1c00066
MS&lt;sup&gt;2&lt;/sup&gt;field: Mikroverunreinigungen mobil messen
Dax, A., Stravs, M., Stamm, C., Ort, C., la Cecilia, D., & Singer, H. (2020). MS2field: Mikroverunreinigungen mobil messen. Aqua & Gas, 100(12), 14-19.
Annotating nontargeted LC-HRMS/MS data with two complementary tandem mass spectral libraries
Oberacher, H., Reinstadler, V., Kreidl, M., Stravs, M. A., Hollender, J., & Schymanski, E. L. (2019). Annotating nontargeted LC-HRMS/MS data with two complementary tandem mass spectral libraries. Metabolites, 9(1), 3 (15 pp.). https://doi.org/10.3390/metabo9010003
The metaRbolomics toolbox in bioconductor and beyond
Stanstrup, J., Broeckling, C., Helmus, R., Hoffmann, N., Mathé, E., Naake, T., … Neumann, S. (2019). The metaRbolomics toolbox in bioconductor and beyond. Metabolites, 9(10), 200 (55 pp.). https://doi.org/10.3390/metabo9100200
Biodiversity drives micropollutant biotransformation in freshwater phytoplankton assemblages
Stravs, M. A., Pomati, F., & Hollender, J. (2019). Biodiversity drives micropollutant biotransformation in freshwater phytoplankton assemblages. Environmental Science and Technology, 53(8), 4265-4273. https://doi.org/10.1021/acs.est.8b07018
Seasonal dynamics of glyphosate and AMPA in Lake Greifensee: rapid microbial degradation in the epilimnion during summer
Huntscha, S., Stravs, M. A., Bühlmann, A., Ahrens, C. H., Frey, J. E., Pomati, F., … Poiger, T. (2018). Seasonal dynamics of glyphosate and AMPA in Lake Greifensee: rapid microbial degradation in the epilimnion during summer. Environmental Science and Technology, 52(8), 4641-4649. https://doi.org/10.1021/acs.est.8b00314
Similarity of high-resolution tandem mass spectrometry spectra of structurally related micropollutants and transformation products
Schollée, J. E., Schymanski, E. L., Stravs, M. A., Gulde, R., Thomaidis, N. S., & Hollender, J. (2017). Similarity of high-resolution tandem mass spectrometry spectra of structurally related micropollutants and transformation products. Journal of the American Society for Mass Spectrometry, 28(12), 2692-2704. https://doi.org/10.1007/s13361-017-1797-6
Exploring micropollutant biotransformation in three freshwater phytoplankton species
Stravs, M. A., Pomati, F., & Hollender, J. (2017). Exploring micropollutant biotransformation in three freshwater phytoplankton species. Environmental Science: Processes and Impacts, 19(6), 822-832. https://doi.org/10.1039/C7EM00100B
On biotransformation of polar organic micropollutants in phytoplankton
Stravs, M. A. (2017). On biotransformation of polar organic micropollutants in phytoplankton [Doctoral dissertation, ETH Zürich]. https://doi.org/10.3929/ethz-b-000212315
Automated screening for small organic ligands using DNA-encoded chemical libraries
Decurtins, W., Wichert, M., Franzini, R. M., Buller, F., Stravs, M. A., Zhang, Y., … Scheuermann, J. (2016). Automated screening for small organic ligands using DNA-encoded chemical libraries. Nature Protocols, 11(4), 764-780. https://doi.org/10.1038/nprot.2016.039
Microvolume trace environmental analysis using peak-focusing online solid-phase extraction–nano-liquid chromatography–high-resolution mass spectrometry
Stravs, M. A., Mechelke, J., Ferguson, P. L., Singer, H., & Hollender, J. (2016). Microvolume trace environmental analysis using peak-focusing online solid-phase extraction–nano-liquid chromatography–high-resolution mass spectrometry. Analytical and Bioanalytical Chemistry, 408, 1879-1890. https://doi.org/10.1007/s00216-015-9294-x
Automatic recalibration and processing of tandem mass spectra using formula annotation
Stravs, M. A., Schymanski, E. L., Singer, H. P., & Hollender, J. (2013). Automatic recalibration and processing of tandem mass spectra using formula annotation. Journal of Mass Spectrometry, 48(1), 89-99. https://doi.org/10.1002/jms.3131