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The trade-off between individual metabolic specialization and versatility determines the metabolic efficiency of microbial communities
Wang, M., Chen, X., Fang, Y., Zheng, X., Huang, T., Nie, Y., & Wu, X. L. (2024). The trade-off between individual metabolic specialization and versatility determines the metabolic efficiency of microbial communities. Cell Systems, 15(1), 63-74.e5. https://doi.org/10.1016/j.cels.2023.12.004
How do microbes grow in nature? The role of population dynamics in microbial ecology and evolution
Fink, J. W., & Manhart, M. (2023). How do microbes grow in nature? The role of population dynamics in microbial ecology and evolution. Current Opinion in Systems Biology, 36, 100470 (11 pp.). https://doi.org/10.1016/j.coisb.2023.100470
The growth yield of Aminobacter niigataensis MSH1 on the micropollutant 2,6-Dichlorobenzamide decreases substantially at trace substrate concentrations
Raes, B., Wang, J., Horemans, B., Dirckx, L., Waldherr, S., Kohler, H. P. E., & Springael, D. (2023). The growth yield of Aminobacter niigataensis MSH1 on the micropollutant 2,6-Dichlorobenzamide decreases substantially at trace substrate concentrations. Environmental Science and Technology, 58, 2859-2869. https://doi.org/10.1021/acs.est.3c06883
Effects of microscopic water and nutrient conditions on the host lysis process of <em>pseudomonas aeruginosa</em> phage
Wang, Y., Ruan, C., Xie, W., Zhu, K., Chen, G., Liu, Y., & Wang, G. (2023). Effects of microscopic water and nutrient conditions on the host lysis process of pseudomonas aeruginosa phage. Tu Rang Xue Bao/Acta Pedologica Sinica, 60(3), 835-845. https://doi.org/10.11766/trxb202201070528
The versatile natural product enzymology of marine microbial communities
Fraley, A. E., Robinson, S. L., & Piel, J. (2022). The versatile natural product enzymology of marine microbial communities. Aldrichimica Acta, 55(3), 55-75.
Causes and consequences of group formation during the degradation of carbon polymers by bacteria
Povolo, V. R. (2022). Causes and consequences of group formation during the degradation of carbon polymers by bacteria [Doctoral dissertation]. ETH Zurich.
Widespread microbial utilization of ribosomal β-amino acid-containing peptides and proteins
Scott, T. A., Verest, M., Farnung, J., Forneris, C. C., Robinson, S. L., Ji, X., … Piel, J. (2022). Widespread microbial utilization of ribosomal β-amino acid-containing peptides and proteins. Chem, 8(10), 2659-2677. https://doi.org/10.1016/j.chempr.2022.09.017
Child hand contamination is associated with subsequent pediatric diarrhea in rural Democratic Republic of the Congo (REDUCE Program)
George, C. M., Cirhuza, L. B., Birindwa, A., Williams, C., Beck, S., Julian, T., … Mirindi, P. (2021). Child hand contamination is associated with subsequent pediatric diarrhea in rural Democratic Republic of the Congo (REDUCE Program). Tropical Medicine and International Health, 26(1), 102-110. https://doi.org/10.1111/tmi.13510
Microfluidics for single-cell study of antibiotic tolerance and persistence induced by nutrient limitation
Moreno-Gámez, S., Dal Co, A., van Vliet, S., & Ackermann, M. (2021). Microfluidics for single-cell study of antibiotic tolerance and persistence induced by nutrient limitation. In N. Verstraeten & J. Michiels (Eds.), Methods in molecular biology: Vol. 2357. Bacterial persistence. Methods and protocols (pp. 107-124). https://doi.org/10.1007/978-1-0716-1621-5_8
Functional microbial landscapes
Ciccarese, D., & Johnson, D. R. (2019). Functional microbial landscapes. In S. Agathos & B. Stenuit (Eds.), Comprehensive biotechnology: Vol. 6. Environmental and related biotechnologies (pp. 42-51). https://doi.org/10.1016/B978-0-444-64046-8.00472-9
Cyt-Geist: current and future challenges in cytometry: reports of the CYTO 2018 conference workshops
Czechowska, K., Lannigan, J., Wang, L., Arcidiacono, J., Ashhurst, T. M., Barnard, R. M., … Tárnok, A. (2019). Cyt-Geist: current and future challenges in cytometry: reports of the CYTO 2018 conference workshops. Cytometry Part A, 95(6), 598-644. https://doi.org/10.1002/cyto.a.23777
Biotreatment of drinking water
Hammes, F., Velten, S., Egli, T., & Juhna, T. (2019). Biotreatment of drinking water. In M. Y. Murray (Ed.), Comprehensive biotechnology: Vol. 6. Environmental and related biotechnologies (pp. 463-476). https://doi.org/10.1016/B978-0-444-64046-8.00374-8
Biotransformation of short-chain chlorinated paraffins (SCCPs) with LinA2: a HCH and HBCD converting bacterial dehydrohalogenase
Heeb, N. V., Schalles, S., Lehner, S., Schinkel, L., Schilling, I., Lienemann, P., … Kohler, H. P. E. (2019). Biotransformation of short-chain chlorinated paraffins (SCCPs) with LinA2: a HCH and HBCD converting bacterial dehydrohalogenase. Chemosphere, 226, 744-754. https://doi.org/10.1016/j.chemosphere.2019.03.169
Assessing the environmental transformation of nanoplastic through <sup>13</sup>C-labelled polymers
Sander, M., Kohler, H. P. E., & McNeill, K. (2019). Assessing the environmental transformation of nanoplastic through 13C-labelled polymers. Nature Nanotechnology, 14(4), 301-303. https://doi.org/10.1038/s41565-019-0420-3
Role of microbial cell properties on bacterial pathogen and coliphage removal in biochar-modified stormwater biofilters
Afrooz, A. R. M. N., Pitol, A. K., Kitt, D., & Boehm, A. B. (2018). Role of microbial cell properties on bacterial pathogen and coliphage removal in biochar-modified stormwater biofilters. Environmental Science: Water Research and Technology, 4(12), 2160-2169. https://doi.org/10.1039/c8ew00297e
Wavelength-dependent damage to adenoviral proteins across the germicidal UV spectrum
Beck, S. E., Hull, N. M., Poepping, C., & Linden, K. G. (2018). Wavelength-dependent damage to adenoviral proteins across the germicidal UV spectrum. Environmental Science and Technology, 52(1), 223-229. https://doi.org/10.1021/acs.est.7b04602
Mediation of effects of biofiltration on bacterial regrowth, <i>Legionella pneumophila</i>, and the microbial community structure under hot water plumbing conditions
Dai, D., Proctor, C. R., Williams, K., Edwards, M. A., & Pruden, A. (2018). Mediation of effects of biofiltration on bacterial regrowth, Legionella pneumophila, and the microbial community structure under hot water plumbing conditions. Environmental Science: Water Research and Technology, 4(2), 183-194. https://doi.org/10.1039/c7ew00301c
Local fitness landscapes predict yeast evolutionary dynamics in directionally changing environments
Gorter, F. A., Aarts, M. G. M., Zwaan, B. J., & de Visser, J. A. G. M. (2018). Local fitness landscapes predict yeast evolutionary dynamics in directionally changing environments. Genetics, 208(1), 307-322. https://doi.org/10.1534/genetics.117.300519
Kinetics and stereochemistry of LinB-catalyzed δ-HBCD transformation: comparison of <i>in vitro</i> and <i>in silico</i> results
Heeb, N. V., Mazenauer, M., Wyss, S., Geueke, B., Kohler, H. P. E., & Lienemann, P. (2018). Kinetics and stereochemistry of LinB-catalyzed δ-HBCD transformation: comparison of in vitro and in silico results. Chemosphere, 207, 118-129. https://doi.org/10.1016/j.chemosphere.2018.05.057
Short-term organic carbon migration from polymeric materials in contact with chlorinated drinking water
Mao, G., Wang, Y., & Hammes, F. (2018). Short-term organic carbon migration from polymeric materials in contact with chlorinated drinking water. Science of the Total Environment, 613-614, 1220-1227. https://doi.org/10.1016/j.scitotenv.2017.09.166
 

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