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  • (-) Organizational Unit = Environmental Microbiology UMIK
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  • (-) Keywords ≠ Escherichia coli
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<em>Escherichia coli</em> contamination across multiple environmental compartments (soil, hands, drinking water, and handwashing water) in urban Harare: correlations and risk factors
Navab-Daneshmand, T., Friedrich, M. N. D., Gächter, M., Montealegre, M. C., Mlambo, L. S., Nhiwatiwa, T., … Julian, T. R. (2018). Escherichia coli contamination across multiple environmental compartments (soil, hands, drinking water, and handwashing water) in urban Harare: correlations and risk factors. American Journal of Tropical Medicine and Hygiene, 98(3), 803-813. https://doi.org/10.4269/ajtmh.17-0521
<I>Escherichia coli</I> O157 can grow in natural freshwater at low carbon concentrations
Vital, M., Hammes, F., & Egli, T. (2008). Escherichia coli O157 can grow in natural freshwater at low carbon concentrations. Environmental Microbiology, 10(9), 2387-2396. https://doi.org/10.1111/j.1462-2920.2008.01664.x
<I>In vitro</I> transcription profiling of the σ<SUP>S</SUP> subunit of bacterial RNA polymerase: re-definition of the σ<SUP>S</SUP> regulon and identification of σ<SUP>S</SUP>-specific promoter sequence elements
Maciąg, A., Peano, C., Pietrelli, A., Egli, T., De Bellis, G., & Landini, P. (2011). In vitro transcription profiling of the σS subunit of bacterial RNA polymerase: re-definition of the σS regulon and identification of σS-specific promoter sequence elements. Nucleic Acids Research, 39(13), 5338-5355. https://doi.org/10.1093/nar/gkr129
<I>Sphingomicrobium lutaoense</I> gen. nov., sp. nov., isolated from a coastal hot spring
Kämpfer, P., Arun, A. B., Young, C. C., Busse, H. J., Kassmannhuber, J., Rosselló-Móra, R., … Chen, W. M. (2012). Sphingomicrobium lutaoense gen. nov., sp. nov., isolated from a coastal hot spring. International Journal of Systematic and Evolutionary Microbiology, 62(6), 1326-1330. https://doi.org/10.1099/ijs.0.034413-0
<I>ipso</I>-hydroxylation and subsequent fragmentation: a novel microbial strategy to eliminate sulfonamide antibiotics
Ricken, B., Corvini, P. F. X., Cichocka, D., Parisi, M., Lenz, M., Wyss, D., … Kolvenbach, B. A. (2013). ipso-hydroxylation and subsequent fragmentation: a novel microbial strategy to eliminate sulfonamide antibiotics. Applied and Environmental Microbiology, 79(18), 5550-5558. https://doi.org/10.1128/AEM.00911-13
<I>ipso</I>-substitution - a novel pathway for microbial metabolism of endocrine-disrupting 4-nonylphenols, 4-alkoxyphenols, and bisphenol A
Kohler, H. P. E., Gabriel, F. L. P., & Giger, W. (2008). ipso-substitution - a novel pathway for microbial metabolism of endocrine-disrupting 4-nonylphenols, 4-alkoxyphenols, and bisphenol A. Chimia, 62(5), 358-363. https://doi.org/10.2533/chimia.2008.358
<I>ipso</I>-substitution: a general biochemical and biodegradation mechanism to cleave <I>α</I>-quaternary alkylphenols and bisphenol A
Gabriel, F. L. P., Cyris, M., Giger, W., & Kohler, H. P. E. (2007). ipso-substitution: a general biochemical and biodegradation mechanism to cleave α-quaternary alkylphenols and bisphenol A. Chemistry and Biodiversity, 4(9), 2123-2137. https://doi.org/10.1002/cbdv.200790170
<i>Chelativorans multitrophicus</i> gen. nov., sp. nov. and <i>Chelativorans oligotrophicus</i> sp. nov., aerobic EDTA-degrading bacteria
Doronina, N. V., Kaparullina, E. N., Trotsenko, Y. A., Nörtemann, B., Bucheli-Witschel, M., Weilenmann, H. U., & Egli, T. (2010). Chelativorans multitrophicus gen. nov., sp. nov. and Chelativorans oligotrophicus sp. nov., aerobic EDTA-degrading bacteria. International Journal of Systematic and Evolutionary Microbiology, 60(5), 1044-1051. https://doi.org/10.1099/ijs.0.003152-0
A combination of extreme environmental conditions favor the prevalence of endospore-forming firmicutes
Filippidou, S., Wunderlin, T., Junier, T., Jeanneret, N., Dorador, C., Molina, V., … Junier, P. (2016). A combination of extreme environmental conditions favor the prevalence of endospore-forming firmicutes. Frontiers in Microbiology, 7, 1707 (11 pp.). https://doi.org/10.3389/fmicb.2016.01707
A comparative study of three different assimilable organic carbon (AOC) methods: results of a round-robin test
Ross, P. S., Hammes, F., Dignum, M., Magic-Knezev, A., Hambsch, B., & Rietveld, L. C. (2013). A comparative study of three different assimilable organic carbon (AOC) methods: results of a round-robin test. Water Science and Technology: Water Supply, 13(4), 1024-1033. https://doi.org/10.2166/ws.2013.079
A conceptual framework for invasion in microbial communities
Kinnunen, M., Dechesne, A., Proctor, C., Hammes, F., Johnson, D., Quintela-Baluja, M., … Smets, B. F. (2016). A conceptual framework for invasion in microbial communities. ISME Journal, 10, 2773-2779. https://doi.org/10.1038/ismej.2016.75
A cryptic heterogametic transition revealed by sex-linked DNA markers in Palearctic green toads
Stöck, M., Croll, D., Dumas, Z., Biollay, S., Wang, J., & Perrin, N. (2011). A cryptic heterogametic transition revealed by sex-linked DNA markers in Palearctic green toads. Journal of Evolutionary Biology, 24(5), 1064-1070. https://doi.org/10.1111/j.1420-9101.2011.02239.x
A defined, glucose-limited mineral medium for the cultivation of <I>Listeria</I> spp.
Schneebeli, R., & Egli, T. (2013). A defined, glucose-limited mineral medium for the cultivation of Listeria spp. Applied and Environmental Microbiology, 79(8), 2503-2511. https://doi.org/10.1128/AEM.03538-12
A framework for establishing predictive relationships between specific bacterial 16S rRNA sequence abundances and biotransformation rates
Helbling, D. E., Johnson, D. R., Lee, T. K., Scheidegger, A., & Fenner, K. (2015). A framework for establishing predictive relationships between specific bacterial 16S rRNA sequence abundances and biotransformation rates. Water Research, 70, 471-484. https://doi.org/10.1016/j.watres.2014.12.013
A functional perspective on phenotypic heterogeneity in microorganisms
Ackermann, M. (2015). A functional perspective on phenotypic heterogeneity in microorganisms. Nature Reviews Microbiology, 13, 497-508. https://doi.org/10.1038/nrmicro3491
A genome-wide analysis of promoter-mediated phenotypic noise in <I>Escherichia coli</I>
Silander, O. K., Nikolic, N., Zaslaver, A., Bren, A., Kikoin, I., Alon, U., & Ackermann, M. (2012). A genome-wide analysis of promoter-mediated phenotypic noise in Escherichia coli. PLoS Genetics, 8(1), e1002443 (13 pp.). https://doi.org/10.1371/journal.pgen.1002443
A microbiology-based multi-parametric approach towards assessing biological stability in drinking water distribution networks
Lautenschlager, K., Hwang, C., Liu, W. T., Boon, N., Köster, O., Vrouwenvelder, H., … Hammes, F. (2013). A microbiology-based multi-parametric approach towards assessing biological stability in drinking water distribution networks. Water Research, 47(9), 3015-3025. https://doi.org/10.1016/j.watres.2013.03.002
A model framework to describe growth-linked biodegradation of trace-level pollutants in the presence of coincidental carbon substrates and microbes
Liu, L., Helbling, D. E., Kohler, H. P. E., & Smets, B. F. (2014). A model framework to describe growth-linked biodegradation of trace-level pollutants in the presence of coincidental carbon substrates and microbes. Environmental Science and Technology, 48(22), 13358-13366. https://doi.org/10.1021/es503491w
A new method to assess the influence of migration from polymeric materials on the biostability of drinking water
Bucheli-Witschel, M., Kötzsch, S., Darr, S., Widler, R., & Egli, T. (2012). A new method to assess the influence of migration from polymeric materials on the biostability of drinking water. Water Research, 46(13), 4246-4260. https://doi.org/10.1016/j.watres.2012.05.008
A passive mutualistic interaction promotes the evolution of spatial structure within microbial populations
Marchal, M., Goldschmidt, F., Derksen-Müller, S. N., Panke, S., Ackermann, M., & Johnson, D. R. (2017). A passive mutualistic interaction promotes the evolution of spatial structure within microbial populations. BMC Evolutionary Biology, 17, 106 (14 pp.). https://doi.org/10.1186/s12862-017-0950-y
 

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