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<I>Escherichia coli</I> O157 can grow in natural freshwater at low carbon concentrations
Vital, M., Hammes, F., & Egli, T. (2008). Escherichia coli O157 can grow in natural freshwater at low carbon concentrations. Environmental Microbiology, 10(9), 2387-2396. https://doi.org/10.1111/j.1462-2920.2008.01664.x
<I>ipso</I>-substitution: a general biochemical and biodegradation mechanism to cleave <I>α</I>-quaternary alkylphenols and bisphenol A
Gabriel, F. L. P., Cyris, M., Giger, W., & Kohler, H. P. E. (2007). ipso-substitution: a general biochemical and biodegradation mechanism to cleave α-quaternary alkylphenols and bisphenol A. Chemistry and Biodiversity, 4(9), 2123-2137. https://doi.org/10.1002/cbdv.200790170
<em>Chelativorans multitrophicus</em> gen. nov., sp. nov. and <em>Chelativorans oligotrophicus</em> sp. nov., aerobic EDTA-degrading bacteria
Doronina, N. V., Kaparullina, E. N., Trotsenko, Y. A., Nörtemann, B., Bucheli-Witschel, M., Weilenmann, H. U., & Egli, T. (2010). Chelativorans multitrophicus gen. nov., sp. nov. and Chelativorans oligotrophicus sp. nov., aerobic EDTA-degrading bacteria. International Journal of Systematic and Evolutionary Microbiology, 60(5), 1044-1051. https://doi.org/10.1099/ijs.0.003152-0
<em>Sphingomicrobium lutaoense</em> gen. nov., sp. nov., isolated from a coastal hot spring
Kämpfer, P., Arun, A. B., Young, C. C., Busse, H. J., Kassmannhuber, J., Rosselló-Móra, R., … Chen, W. M. (2012). Sphingomicrobium lutaoense gen. nov., sp. nov., isolated from a coastal hot spring. International Journal of Systematic and Evolutionary Microbiology, 62(6), 1326-1330. https://doi.org/10.1099/ijs.0.034413-0
A comparative study of three different assimilable organic carbon (AOC) methods: results of a round-robin test
Ross, P. S., Hammes, F., Dignum, M., Magic-Knezev, A., Hambsch, B., & Rietveld, L. C. (2013). A comparative study of three different assimilable organic carbon (AOC) methods: results of a round-robin test. Water Science and Technology: Water Supply, 13(4), 1024-1033. https://doi.org/10.2166/ws.2013.079
A conceptual framework for invasion in microbial communities
Kinnunen, M., Dechesne, A., Proctor, C., Hammes, F., Johnson, D., Quintela-Baluja, M., … Smets, B. F. (2016). A conceptual framework for invasion in microbial communities. ISME Journal, 10, 2773-2779. https://doi.org/10.1038/ismej.2016.75
A cryptic heterogametic transition revealed by sex-linked DNA markers in Palearctic green toads
Stöck, M., Croll, D., Dumas, Z., Biollay, S., Wang, J., & Perrin, N. (2011). A cryptic heterogametic transition revealed by sex-linked DNA markers in Palearctic green toads. Journal of Evolutionary Biology, 24(5), 1064-1070. https://doi.org/10.1111/j.1420-9101.2011.02239.x
A framework for establishing predictive relationships between specific bacterial 16S rRNA sequence abundances and biotransformation rates
Helbling, D. E., Johnson, D. R., Lee, T. K., Scheidegger, A., & Fenner, K. (2015). A framework for establishing predictive relationships between specific bacterial 16S rRNA sequence abundances and biotransformation rates. Water Research, 70, 471-484. https://doi.org/10.1016/j.watres.2014.12.013
A functional perspective on phenotypic heterogeneity in microorganisms
Ackermann, M. (2015). A functional perspective on phenotypic heterogeneity in microorganisms. Nature Reviews Microbiology, 13, 497-508. https://doi.org/10.1038/nrmicro3491
A growing focus on bacterial individuality
Ackermann, M., & Schreiber, F. (2015). A growing focus on bacterial individuality. Environmental Microbiology, 17(7), 2193-2195. https://doi.org/10.1111/1462-2920.12877
A microbiology-based multi-parametric approach towards assessing biological stability in drinking water distribution networks
Lautenschlager, K., Hwang, C., Liu, W. T., Boon, N., Köster, O., Vrouwenvelder, H., … Hammes, F. (2013). A microbiology-based multi-parametric approach towards assessing biological stability in drinking water distribution networks. Water Research, 47(9), 3015-3025. https://doi.org/10.1016/j.watres.2013.03.002
A model framework to describe growth-linked biodegradation of trace-level pollutants in the presence of coincidental carbon substrates and microbes
Liu, L., Helbling, D. E., Kohler, H. P. E., & Smets, B. F. (2014). A model framework to describe growth-linked biodegradation of trace-level pollutants in the presence of coincidental carbon substrates and microbes. Environmental Science and Technology, 48(22), 13358-13366. https://doi.org/10.1021/es503491w
A new method to assess the influence of migration from polymeric materials on the biostability of drinking water
Bucheli-Witschel, M., Kötzsch, S., Darr, S., Widler, R., & Egli, T. (2012). A new method to assess the influence of migration from polymeric materials on the biostability of drinking water. Water Research, 46(13), 4246-4260. https://doi.org/10.1016/j.watres.2012.05.008
A pipeline for developing and testing staining protocols for flow cytometry, demonstrated with SYBR Green I and propidium iodide viability staining
Nescerecka, A., Hammes, F., & Juhna, T. (2016). A pipeline for developing and testing staining protocols for flow cytometry, demonstrated with SYBR Green I and propidium iodide viability staining. Journal of Microbiological Methods, 131, 172-180. https://doi.org/10.1016/j.mimet.2016.10.022
A simple plasmid-based transient gene expression method using High Five cells
Shen, X., Pitol, A. K., Bachmann, V., Hacker, D. L., Baldi, L., & Wurm, F. M. (2015). A simple plasmid-based transient gene expression method using High Five cells. Journal of Biotechnology, 216, 67-75. https://doi.org/10.1016/j.jbiotec.2015.10.007
A systematic approach for the assessment of bacterial growth-controlling factors linked to biological stability of drinking water in distribution systems
Prest, E. I., Hammes, F., Kötzsch, S., van Loosdrecht, M. C. M., & Vrouwenvelder, J. S. (2016). A systematic approach for the assessment of bacterial growth-controlling factors linked to biological stability of drinking water in distribution systems. Water Science and Technology: Water Supply, 16(4), 865-880. https://doi.org/10.2166/ws.2016.001
A tiered procedure for assessing the formation of biotransformation products of pharmaceuticals and biocides during activated sludge treatment
Kern, S., Baumgartner, R., Helbling, D. E., Hollender, J., Singer, H., Loos, M. J., … Fenner, K. (2010). A tiered procedure for assessing the formation of biotransformation products of pharmaceuticals and biocides during activated sludge treatment. Journal of Environmental Monitoring, 12(11), 2100-2111. https://doi.org/10.1039/c0em00238k
Abundance and composition of indigenous bacterial communities in a multi-step biofiltration-based drinking water treatment plant
Lautenschlager, K., Hwang, C., Ling, F., Liu, W. T., Boon, N., Köster, O., … Hammes, F. (2014). Abundance and composition of indigenous bacterial communities in a multi-step biofiltration-based drinking water treatment plant. Water Research, 62, 40-52. https://doi.org/10.1016/j.watres.2014.05.035
Accumulation of deleterious mutations during bacterial range expansions
Bosshard, L., Dupanloup, I., Tenaillon, O., Bruggmann, R., Ackermann, M., Peischl, S., & Excoffier, L. (2017). Accumulation of deleterious mutations during bacterial range expansions. Genetics, 207(2), 669-684. https://doi.org/10.1534/genetics.117.300144
Adaptation to UVA radiation of <I>E. coli</I> growing in continuous culture
Berney, M., Weilenmann, H. U., & Egli, T. (2007). Adaptation to UVA radiation of E. coli growing in continuous culture. Journal of Photochemistry and Photobiology B: Biology, 86(2), 149-159. https://doi.org/10.1016/j.jphotobiol.2006.08.014
 

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