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Metabolite toxicity slows local diversity loss during expansion of a microbial cross-feeding community
Goldschmidt, F., Regoes, R. R., & Johnson, D. R. (2018). Metabolite toxicity slows local diversity loss during expansion of a microbial cross-feeding community. ISME Journal, 12(1), 136-144. https://doi.org/10.1038/ismej.2017.147
Phylogenetic clustering of small low nucleic acid-content bacteria across diverse freshwater ecosystems
Proctor, C. R., Besmer, M. D., Langenegger, T., Beck, K., Walser, J. C., Ackermann, M., … Hammes, F. (2018). Phylogenetic clustering of small low nucleic acid-content bacteria across diverse freshwater ecosystems. ISME Journal, 12, 1344-1359. https://doi.org/10.1038/s41396-018-0070-8
Successive range expansion promotes diversity and accelerates evolution in spatially structured microbial populations
Goldschmidt, F., Regoes, R. R., & Johnson, D. R. (2017). Successive range expansion promotes diversity and accelerates evolution in spatially structured microbial populations. ISME Journal, 11(9), 2112-2123. https://doi.org/10.1038/ismej.2017.76
Absolute quantification of microbial taxon abundances
Props, R., Kerckhof, F. M., Rubbens, P., De Vrieze, J., Hernandez Sanabria, E., Waegeman, W., … Boon, N. (2017). Absolute quantification of microbial taxon abundances. ISME Journal, 11(587), 584-587. https://doi.org/10.1038/ismej.2016.117
A conceptual framework for invasion in microbial communities
Kinnunen, M., Dechesne, A., Proctor, C., Hammes, F., Johnson, D., Quintela-Baluja, M., … Smets, B. F. (2016). A conceptual framework for invasion in microbial communities. ISME Journal, 10, 2773-2779. https://doi.org/10.1038/ismej.2016.75
Segregating metabolic processes into different microbial cells accelerates the consumption of inhibitory substrates
Lilja, E. E., & Johnson, D. R. (2016). Segregating metabolic processes into different microbial cells accelerates the consumption of inhibitory substrates. ISME Journal, 10, 1568-1578. https://doi.org/10.1038/ismej.2015.243
Microbial individuality in the natural environment
Ackermann, M. (2013). Microbial individuality in the natural environment. ISME Journal, 7(3), 465-467. https://doi.org/10.1038/ismej.2012.131
In glucose-limited continuous culture the minimum substrate concentration for growth, s<SUB>min</SUB>, is crucial in the competition between the enterobacterium <I>Escherichia coli</I> and <I>Chelatobacter heintzii</I>, an environmentally abundant bacteri
Füchslin, H. P., Schneider, C., & Egli, T. (2012). In glucose-limited continuous culture the minimum substrate concentration for growth, smin, is crucial in the competition between the enterobacterium Escherichia coli and Chelatobacter heintzii, an environmentally abundant bacterium. ISME Journal, 6(4), 777-789. https://doi.org/10.1038/ismej.2011.143
The activity level of a microbial community function can be predicted from its metatranscriptome
Helbling, D. E., Ackermann, M., Fenner, K., Kohler, H. P. E., & Johnson, D. R. (2012). The activity level of a microbial community function can be predicted from its metatranscriptome. ISME Journal, 6(4), 902-904. https://doi.org/10.1038/ismej.2011.158
Metabolic specialization and the assembly of microbial communities
Johnson, D. R., Goldschmidt, F., Lilja, E. E., & Ackermann, M. (2012). Metabolic specialization and the assembly of microbial communities. ISME Journal, 6(11), 1985-1991. https://doi.org/10.1038/ismej.2012.46
Isolation and characterization of low nucleic acid (LNA)-content bacteria
Wang, Y., Hammes, F., Boon, N., Chami, M., & Egli, T. (2009). Isolation and characterization of low nucleic acid (LNA)-content bacteria. ISME Journal, 3(8), 889-902. https://doi.org/10.1038/ismej.2009.46