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  • (-) Eawag Departments = Environmental Microbiology UMIK
  • (-) Publication Year = 2022
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Identifying the sources of intestinal colonization with extended-spectrum β-lactamase-producing <em>Escherichia</em> <em>coli</em> in healthy infants in the community
Amin, M. B., Hoque, K. I., Roy, S., Saha, S. R., Islam, M. R., Julian, T. R., & Islam, M. A. (2022). Identifying the sources of intestinal colonization with extended-spectrum β-lactamase-producing Escherichia coli in healthy infants in the community. Frontiers in Microbiology, 13, 803043 (12 pp.). https://doi.org/10.3389/fmicb.2022.803043
Elucidating the role of O<sub>2</sub> uncoupling in the oxidative biodegradation of organic contaminants by Rieske non-heme iron dioxygenases
Bopp, C. E., Bernet, N. M., Kohler, H. P. E., & Hofstetter, T. B. (2022). Elucidating the role of O2 uncoupling in the oxidative biodegradation of organic contaminants by Rieske non-heme iron dioxygenases. ACS Environmental Au (13 pp.). https://doi.org/10.1021/acsenvironau.2c00023
Towards synthetic PETtrophy: engineering <em>Pseudomonas putida</em> for concurrent polyethylene terephthalate (PET) monomer metabolism and PET hydrolase expression
Brandenberg, O. F., Schubert, O. T., & Kruglyak, L. (2022). Towards synthetic PETtrophy: engineering Pseudomonas putida for concurrent polyethylene terephthalate (PET) monomer metabolism and PET hydrolase expression. Microbial Cell Factories, 21(1), 119 (31 pp.). https://doi.org/10.1186/s12934-022-01849-7
Assessing microbial water quality, users' perceptions and system functionality following a combined water safety intervention in rural Nepal
Bänziger, C., Schertenleib, A., Kunwar, B. M., Bhatta, M. R., & Marks, S. J. (2022). Assessing microbial water quality, users' perceptions and system functionality following a combined water safety intervention in rural Nepal. Frontiers in Water, 3, 750802 (14 pp.). https://doi.org/10.3389/frwa.2021.750802
Inferring transmission fitness advantage of SARS-CoV-2 variants of concern from wastewater samples using digital PCR, Switzerland, December 2020 through March 2021
Caduff, L., Dreifuss, D., Schindler, T., Devaux, A. J., Ganesanandamoorthy, P., Kull, A., … Julian, T. R. (2022). Inferring transmission fitness advantage of SARS-CoV-2 variants of concern from wastewater samples using digital PCR, Switzerland, December 2020 through March 2021. Eurosurveillance: bulletin européen sur les maladies transmissibles, 27(10), 2100806 (20 pp.). https://doi.org/10.2807/1560-7917.ES.2022.27.10.2100806
Wastewater reveals the spatiotemporal spread of SARS-CoV-2 in the Canton of Ticino (Switzerland) during the onset of the COVID-19 pandemic
Cariti, F., Tuñas Corzon, A., Fernandez-Cassi, X., Ganesanandamoorthy, P., Ort, C., Julian, T. R., & Kohn, T. (2022). Wastewater reveals the spatiotemporal spread of SARS-CoV-2 in the Canton of Ticino (Switzerland) during the onset of the COVID-19 pandemic. ACS ES&T Water. https://doi.org/10.1021/acsestwater.2c00082
Potential probiotic approaches to control <em>Legionella</em> in engineered aquatic ecosystems
Cavallaro, A., Rhoads, W. J., Huwiler, S. G., Stachler, E., & Hammes, F. (2022). Potential probiotic approaches to control Legionella in engineered aquatic ecosystems. FEMS Microbiology Ecology, 98(8), 1-9. https://doi.org/10.1093/femsec/fiac071
Electrotaxis-mediated cell motility and nutrient availability determine <em>Chlamydomonas microsphaera</em>-surface interactions in bioelectrochemical systems
Chen, G., Hu, Z., Ebrahimi, A., Johnson, D. R., Wu, F., Sun, Y., … Wang, G. (2022). Electrotaxis-mediated cell motility and nutrient availability determine Chlamydomonas microsphaera-surface interactions in bioelectrochemical systems. Bioelectrochemistry, 143, 107989 (9 pp.). https://doi.org/10.1016/j.bioelechem.2021.107989
Rare and localized events stabilize microbial community composition and patterns of spatial self-organization in a fluctuating environment
Ciccarese, D., Micali, G., Borer, B., Ruan, C., Or, D., & Johnson, D. R. (2022). Rare and localized events stabilize microbial community composition and patterns of spatial self-organization in a fluctuating environment. ISME Journal, 16, 1453-1463. https://doi.org/10.1038/s41396-022-01189-9
Potential crypticity within two decapod (Crustacea) genera: <em>Galathea </em>Fabricius, 1793 and <em>Eualus </em>Thallwitz, 1891 suggested by integrative taxonomic approach
Conforti, S., & Costantini, F. (2022). Potential crypticity within two decapod (Crustacea) genera: Galathea Fabricius, 1793 and Eualus Thallwitz, 1891 suggested by integrative taxonomic approach. Mediterranean Marine Science, 23(3), 499-524. https://doi.org/10.12681/mms.27733
Biophysical properties at patch scale shape the metabolism of biofilm landscapes
Depetris, A., Tagliavini, G., Peter, H., Kühl, M., Holzner, M., & Battin, T. J. (2022). Biophysical properties at patch scale shape the metabolism of biofilm landscapes. npj Biofilms and Microbiomes, 8(1), 5 (12 pp.). https://doi.org/10.1038/s41522-022-00269-0
A procedure for removal of cyanuric acid in swimming pools using a cell-free thermostable cyanuric acid hydrolase
Guo, F., McAuliffe, J. C., Bongiorni, C., Latone, J. A., Pepsin, M. J., Chow, M. S., … Whited, G. M. (2022). A procedure for removal of cyanuric acid in swimming pools using a cell-free thermostable cyanuric acid hydrolase. Journal of Industrial Microbiology and Biotechnology, 49(2), kuab084 (14 pp.). https://doi.org/10.1093/jimb/kuab084
Dynamic character displacement among a pair of bacterial phyllosphere commensals in situ
Hemmerle, L., Maier, B. A., Bortfeld-Miller, M., Ryback, B., Gäbelein, C. G., Ackermann, M., & Vorholt, J. A. (2022). Dynamic character displacement among a pair of bacterial phyllosphere commensals in situ. Nature Communications, 13(1), 2836 (14 pp.). https://doi.org/10.1038/s41467-022-30469-3
Ribosomally derived lipopeptides containing distinct fatty acyl moieties
Hubrich, F., Bösch, N. M., Chepkirui, C., Morinaka, B. I., Rust, M., Gugger, M., … Piel, J. (2022). Ribosomally derived lipopeptides containing distinct fatty acyl moieties. Proceedings of the National Academy of Sciences of the United States of America PNAS, 119(3), e2113120119 (10 pp.). https://doi.org/10.1073/pnas.2113120119
Community instability in the microbial world
Huelsmann, M., & Ackermann, M. (2022). Community instability in the microbial world. Science, 378(6615), 29-30. https://doi.org/10.1126/science.ade2516
Wastewater-based estimation of the effective reproductive number of SARS-CoV-2
Huisman, J. S., Scire, J., Caduff, L., Fernandez-Cassi, X., Ganesanandamoorthy, P., Kull, A., … Julian, T. R. (2022). Wastewater-based estimation of the effective reproductive number of SARS-CoV-2. Environmental Health Perspectives, 130(5), 057011 (12 pp.). https://doi.org/10.1289/EHP10050
Early detection and surveillance of SARS-CoV-2 genomic variants in wastewater using COJAC
Jahn, K., Dreifuss, D., Topolsky, I., Kull, A., Ganesanandamoorthy, P., Fernandez-Cassi, X., … Beerenwinkel, N. (2022). Early detection and surveillance of SARS-CoV-2 genomic variants in wastewater using COJAC. Nature Microbiology, 7, 1151-1160. https://doi.org/10.1038/s41564-022-01185-x
Enzymatic synthesis and formation kinetics of mono- and di-hydroxylated chlorinated paraffins with the bacterial dehalogenase LinB from <em>Sphingobium indicum</em>
Knobloch, M. C., Mathis, F., Fleischmann, T., Kohler, H. P. E., Kern, S., Bleiner, D., & Heeb, N. V. (2022). Enzymatic synthesis and formation kinetics of mono- and di-hydroxylated chlorinated paraffins with the bacterial dehalogenase LinB from Sphingobium indicum. Chemosphere, 291, 132939 (10 pp.). https://doi.org/10.1016/j.chemosphere.2021.132939
Occurrence of opportunistic pathogens in private wells after major flooding events: a four state molecular survey
Mapili, K., Rhoads, W. J., Coughter, M., Pieper, K. J., Edwards, M. A., & Pruden, A. (2022). Occurrence of opportunistic pathogens in private wells after major flooding events: a four state molecular survey. Science of the Total Environment, 826, 153901 (11 pp.). https://doi.org/10.1016/j.scitotenv.2022.153901
Microbial storage and its implications for soil ecology
Mason-Jones, K., Robinson, S. L., Veen, G. F. (C. ), Manzoni, S., & van der Putten, W. H. (2022). Microbial storage and its implications for soil ecology. ISME Journal, 16, 617-629. https://doi.org/10.1038/s41396-021-01110-w