| Function and functional redundancy in microbial systems
Louca, S., Polz, M. F., Mazel, F., Albright, M. B. N., Huber, J. A., O'Connor, M. I., … Wegener Parfrey, L. (2018). Function and functional redundancy in microbial systems. Nature Ecology & Evolution, 2, 936-943. https://doi.org/10.1038/s41559-018-0519-1 |
| Effects of antibiotics on individual bacterial cells
Manjarrez Casas, A. M. (2018). Effects of antibiotics on individual bacterial cells [Doctoral dissertation, ETH Zurich]. https://doi.org/10.3929/ethz-b-000309075 |
| Short-term organic carbon migration from polymeric materials in contact with chlorinated drinking water
Mao, G., Wang, Y., & Hammes, F. (2018). Short-term organic carbon migration from polymeric materials in contact with chlorinated drinking water. Science of the Total Environment, 613-614, 1220-1227. https://doi.org/10.1016/j.scitotenv.2017.09.166 |
| Concurrent processes set <i>E. coli</i> cell division
Micali, G., Grilli, J., Osella, M., & Cosentino Lagomarsino, M. (2018). Concurrent processes set E. coli cell division. Science Advances, 4(11), eaau3324 (7 pp.). https://doi.org/10.1126/sciadv.aau3324 |
| Dissecting the control mechanisms for DNA replication and cell division in <i>E. coli</i>
Micali, G., Grilli, J., Marchi, J., Osella, M., & Cosentino Lagomarsino, M. (2018). Dissecting the control mechanisms for DNA replication and cell division in E. coli. Cell Reports, 25(3), 761-771. https://doi.org/10.1016/j.celrep.2018.09.061 |
| Risk factors for detection, survival, and growth of antibiotic-resistant and pathogenic <i>Escherichia coli</i> in household soils in rural Bangladesh
Montealegre, M. C., Roy, S., Böni, F., Hossain, M. I., Navab-Daneshmand, T., Caduff, L., … Julian, T. R. (2018). Risk factors for detection, survival, and growth of antibiotic-resistant and pathogenic Escherichia coli in household soils in rural Bangladesh. Applied and Environmental Microbiology, 84(24), e01978-18 (14 pp.). https://doi.org/10.1128/AEM.01978-18 |
| <em>Escherichia coli</em> contamination across multiple environmental compartments (soil, hands, drinking water, and handwashing water) in urban Harare: correlations and risk factors
Navab-Daneshmand, T., Friedrich, M. N. D., Gächter, M., Montealegre, M. C., Mlambo, L. S., Nhiwatiwa, T., … Julian, T. R. (2018). Escherichia coli contamination across multiple environmental compartments (soil, hands, drinking water, and handwashing water) in urban Harare: correlations and risk factors. American Journal of Tropical Medicine and Hygiene, 98(3), 803-813. https://doi.org/10.4269/ajtmh.17-0521 |
| Identifying the underlying causes of biological instability in a full-scale drinking water supply system
Nescerecka, A., Juhna, T., & Hammes, F. (2018). Identifying the underlying causes of biological instability in a full-scale drinking water supply system. Water Research, 135, 11-21. https://doi.org/10.1016/j.watres.2018.02.006 |
| Metagenomic characterization of biofilter microbial communities in a full-scale drinking water treatment plant
Oh, S., Hammes, F., & Liu, W. T. (2018). Metagenomic characterization of biofilter microbial communities in a full-scale drinking water treatment plant. Water Research, 128, 278-285. https://doi.org/10.1016/j.watres.2017.10.054 |
| Generality of associations between biological richness and the rates of metabolic processes across microbial communities
Patsch, D., van Vliet, S., Garbani Marcantini, L., & Johnson, D. R. (2018). Generality of associations between biological richness and the rates of metabolic processes across microbial communities. Environmental Microbiology, 20(12), 4356-4368. https://doi.org/10.1111/1462-2920.14352 |
| Transfer of enteric viruses adenovirus and coxsackievirus and bacteriophage MS2 from liquid to human skin
Pitol, A. K., Bischel, H. N., Boehm, A. B., Kohn, T., & Julian, T. R. (2018). Transfer of enteric viruses adenovirus and coxsackievirus and bacteriophage MS2 from liquid to human skin. Applied and Environmental Microbiology, 84(22), e01809-18 (13 pp.). https://doi.org/10.1128/AEM.01809-18 |
| Analyse microbiologique en ligne. Étude des variations de la qualité microbiologique de l'eau potable dans une usine de traitement
Prest, E. I., Schaap, P. G., & Hammes, F. (2018). Analyse microbiologique en ligne. Étude des variations de la qualité microbiologique de l'eau potable dans une usine de traitement. Aqua & Gas, 98(5), 20-24. |
| Detection of microbial disturbances in a drinking water microbial community through continuous acquisition and advanced analysis of flow cytometry data
Props, R., Rubbens, P., Besmer, M., Buysschaert, B., Sigrist, J., Weilenmann, H., … Hammes, F. (2018). Detection of microbial disturbances in a drinking water microbial community through continuous acquisition and advanced analysis of flow cytometry data. Water Research, 145, 73-82. https://doi.org/10.1016/j.watres.2018.08.013 |
| Evolution on the biophysical fitness landscape of an RNA virus
Rotem, A., Serohijos, A. W. R., Chang, C. B., Wolfe, J. T., Fischer, A. E., Mehoke, T. S., … Shakhnovich, E. I. (2018). Evolution on the biophysical fitness landscape of an RNA virus. Molecular Biology and Evolution, 35(10), 2390-2400. https://doi.org/10.1093/molbev/msy131 |
| Opening the black box of spring water microbiology from alpine karst aquifers to support proactive drinking water resource management
Savio, D., Stadler, P., Reischer, G. H., Kirschner, A. K. T., Demeter, K., Linke, R., … Farnleitner, A. H. (2018). Opening the black box of spring water microbiology from alpine karst aquifers to support proactive drinking water resource management. Wiley Interdisciplinary Reviews: Water, 5(3), e1282 (20 pp.). https://doi.org/10.1002/wat2.1282 |
| Isolation of the (+)-pinoresinol-mineralizing <em>Pseudomonas</em> sp. strain SG-MS2 and elucidation of its catabolic pathway
Shettigar, M., Balotra, S., Cahill, D., Warden, A. C., Lacey, M. J., Kohler, H. P. E., … Pandey, G. (2018). Isolation of the (+)-pinoresinol-mineralizing Pseudomonas sp. strain SG-MS2 and elucidation of its catabolic pathway. Applied and Environmental Microbiology, 84(4), e02531-17 (14 pp.). https://doi.org/10.1128/AEM.02531-17 |
| Effective polyploidy causes phenotypic delay and influences bacterial evolvability
Sun, L., Alexander, H. K., Bogos, B., Kiviet, D. J., Ackermann, M., & Bonhoeffer, S. (2018). Effective polyploidy causes phenotypic delay and influences bacterial evolvability. PLoS Biology, 16(2), e2004644 (24 pp.). https://doi.org/10.1371/journal.pbio.2004644 |
| Catabolism of the groundwater micropollutant 2,6-dichlorobenzamide beyond 2,6-dichlorobenzoate is plasmid encoded in <i>Aminobacter</i> sp. MSH1
T'Syen, J., Raes, B., Horemans, B., Tassoni, R., Leroy, B., Lood, C., … Springael, D. (2018). Catabolism of the groundwater micropollutant 2,6-dichlorobenzamide beyond 2,6-dichlorobenzoate is plasmid encoded in Aminobacter sp. MSH1. Applied Microbiology and Biotechnology, 102(18), 7963-7979. https://doi.org/10.1007/s00253-018-9189-9 |
| Flow-cytometric quantification of microbial cells on sand from water biofilters
Vignola, M., Werner, D., Hammes, F., King, L. C., & Davenport, R. J. (2018). Flow-cytometric quantification of microbial cells on sand from water biofilters. Water Research, 143, 66-76. https://doi.org/10.1016/j.watres.2018.05.053 |
| Prolonged bacterial lag time results in small colony variants that represent a sub-population of persisters
Vulin, C., Leimer, N., Huemer, M., Ackermann, M., & Zinkernagel, A. S. (2018). Prolonged bacterial lag time results in small colony variants that represent a sub-population of persisters. Nature Communications, 9(1), 4074 (8 pp.). https://doi.org/10.1038/s41467-018-06527-0 |