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Stochastic gene expression influences the selection of antibiotic resistance mutations
Sun, L., Ashcroft, P., Ackermann, M., & Bonhoeffer, S. (2020). Stochastic gene expression influences the selection of antibiotic resistance mutations. Molecular Biology and Evolution, 37(1), 58-70. https://doi.org/10.1093/molbev/msz199
Mutational and selective processes involved in evolution during bacterial range expansions
Bosshard, L., Peischl, S., Ackermann, M., & Excoffier, L. (2019). Mutational and selective processes involved in evolution during bacterial range expansions. Molecular Biology and Evolution, 36(10), 2313-2327. https://doi.org/10.1093/molbev/msz148
Genomics of parallel ecological speciation in Lake Victoria cichlids
Meier, J. I., Marques, D. A., Wagner, C. E., Excoffier, L., & Seehausen, O. (2018). Genomics of parallel ecological speciation in Lake Victoria cichlids. Molecular Biology and Evolution, 35(6), 1489-1506. https://doi.org/10.1093/molbev/msy051
Evolution on the biophysical fitness landscape of an RNA virus
Rotem, A., Serohijos, A. W. R., Chang, C. B., Wolfe, J. T., Fischer, A. E., Mehoke, T. S., … Shakhnovich, E. I. (2018). Evolution on the biophysical fitness landscape of an RNA virus. Molecular Biology and Evolution, 35(10), 2390-2400. https://doi.org/10.1093/molbev/msy131
Adaptive mutations in RNA polymerase and the transcriptional terminator <i>Rho</i> have similar effects on <i>Escherichia coli</i> gene expression
González-González, A., Hug, S. M., Rodríguez-Verdugo, A., Patel, J. S., & Gaut, B. S. (2017). Adaptive mutations in RNA polymerase and the transcriptional terminator Rho have similar effects on Escherichia coli gene expression. Molecular Biology and Evolution, 34(11), 2839-2855. https://doi.org/10.1093/molbev/msx216
First-step mutations during adaptation restore the expression of hundreds of genes
Rodríguez-Verdugo, A., Tenaillon, O., & Gaut, B. S. (2016). First-step mutations during adaptation restore the expression of hundreds of genes. Molecular Biology and Evolution, 33(1), 25-39. https://doi.org/10.1093/molbev/msv228
Origins of shared genetic variation in African cichlids
Loh, Y. H. E., Bezault, E., Muenzel, F. M., Roberts, R. B., Swofford, R., Barluenga, M., … Streelman, J. T. (2013). Origins of shared genetic variation in African cichlids. Molecular Biology and Evolution, 30(4), 906-917. https://doi.org/10.1093/molbev/mss326
Genomewide association between insertions/deletions and the nucleotide diversity in bacteria
Zhu, L., Wang, Q., Tang, P., Araki, H., & Tian, D. (2009). Genomewide association between insertions/deletions and the nucleotide diversity in bacteria. Molecular Biology and Evolution, 26(10), 2353-2361. https://doi.org/10.1093/molbev/msp144
Age of cichlids: new dates for ancient lake fish radiations
Genner, M. J., Seehausen, O., Lunt, D. H., Joyce, D. A., Shaw, P. W., Carvalho, G. R., & Turner, G. F. (2007). Age of cichlids: new dates for ancient lake fish radiations. Molecular Biology and Evolution, 24(5), 1269-1282. https://doi.org/10.1093/molbev/msm050