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	Dispersal behaviour and riverine network connectivity shape the genetic diversity of freshwater amphipod metapopulations Alther, R., Fronhofer, E. A., & Altermatt, F. (2021). Dispersal behaviour and riverine network connectivity shape the genetic diversity of freshwater amphipod metapopulations. Molecular Ecology. https://doi.org/10.1111/mec.16201 Detailed Record Published Version
	Assessing the impact of the threatened crucian carp (<em>Carassius carassius</em>) on pond invertebrate diversity: A comparison of conventional and molecular tools Harper, L. R., Lawson Handley, L., Sayer, C. D., Read, D. S., Benucci, M., Blackman, R. C., … Hänfling, B. (2021). Assessing the impact of the threatened crucian carp (Carassius carassius) on pond invertebrate diversity: A comparison of conventional and molecular tools. Molecular Ecology, 30, 3252-3269. https://doi.org/10.1111/mec.15670 Detailed Record Published Version
	Decision-making and best practices for taxonomy-free environmental DNA metabarcoding in biomonitoring using Hill numbers Mächler, E., Walser, J. C., & Altermatt, F. (2021). Decision-making and best practices for taxonomy-free environmental DNA metabarcoding in biomonitoring using Hill numbers. Molecular Ecology, 30(13), 3326-3339. https://doi.org/10.1111/mec.15725 Detailed Record Published Version Accepted Version
	Environmental versus extra-organismal DNA Pawlowski, J., Apothéloz-Perret-Gentil, L., & Altermatt, F. (2021). Environmental versus extra-organismal DNA. Molecular Ecology, 30(19), 4606-4607. https://doi.org/10.1111/mec.16144 Detailed Record Published Version
	Migration without interbreeding: evolutionary history of a highly selfing Mediterranean grass inferred from whole genomes Stritt, C., Gimmi, E. L., Wyler, M., Bakali, A. H., Skalska, A., Hasterok, R., … Roulin, A. C. (2021). Migration without interbreeding: evolutionary history of a highly selfing Mediterranean grass inferred from whole genomes. Molecular Ecology. https://doi.org/10.1111/mec.16207 Detailed Record Published Version
	Resurrecting the metabolome: rapid evolution magnifies the metabolomic plasticity to predation in a natural <em>Daphnia</em> population Zhang, C., Jones, M., Govaert, L., Viant, M., De Meester, L., & Stoks, R. (2021). Resurrecting the metabolome: rapid evolution magnifies the metabolomic plasticity to predation in a natural Daphnia population. Molecular Ecology, 30(10), 2285-2297. https://doi.org/10.1111/mec.15886 Detailed Record Published Version Accepted Version
	Movement of transposable elements contributes to cichlid diversity Carleton, K. L., Conte, M. A., Malinsky, M., Nandamuri, S. P., Sandkam, B. A., Meier, J. I., … Kocher, T. D. (2020). Movement of transposable elements contributes to cichlid diversity. Molecular Ecology, 29(24), 4956-4969. https://doi.org/10.1111/mec.15685 Detailed Record Published Version
	Structural genomic variation leads to genetic differentiation in Lake Tanganyika's sardines Junker, J., Rick, J. A., McIntyre, P. B., Kimirei, I., Sweke, E. A., Mosille, J. B., … Wagner, C. E. (2020). Structural genomic variation leads to genetic differentiation in Lake Tanganyika's sardines. Molecular Ecology, 29(17), 3277-3298. https://doi.org/10.1111/mec.15559 Detailed Record Published Version Accepted Version
	Environmental DNA: What's behind the term? Clarifying the terminology and recommendations for its future use in biomonitoring Pawlowski, J., Apothéloz-Perret-Gentil, L., & Altermatt, F. (2020). Environmental DNA: What's behind the term? Clarifying the terminology and recommendations for its future use in biomonitoring. Molecular Ecology, 29(22), 4258-4264. https://doi.org/10.1111/mec.15643 Detailed Record Published Version Accepted Version
	Genomic insights into the vulnerability of sympatric whitefish species flocks Feulner, P. G. D., & Seehausen, O. (2019). Genomic insights into the vulnerability of sympatric whitefish species flocks. Molecular Ecology, 28, 615-629. https://doi.org/10.1111/mec.14977 Detailed Record Published Version Accepted Version
	Non‐random associations of maternally transmitted symbionts in insects: the roles of drift versus biased co‐transmission and selection Mathé‐Hubert, H., Kaech, H., Hertaeg, C., Jaenike, J., & Vorburger, C. (2019). Non‐random associations of maternally transmitted symbionts in insects: the roles of drift versus biased co‐transmission and selection. Molecular Ecology, 28, 5330-5346. https://doi.org/10.1111/mec.15206 Detailed Record Published Version Accepted Version
	Detecting the genomic signal of polygenic adaptation and the role of epistasis in evolution Csilléry, K., Rodríguez-Verdugo, A., Rellstab, C., & Guillaume, F. (2018). Detecting the genomic signal of polygenic adaptation and the role of epistasis in evolution. Molecular Ecology, 27(3), 606-612. https://doi.org/10.1111/mec.14499 Detailed Record Published Version Accepted Version
	Cryptic species as a window into the paradigm shift of the species concept Fišer, C., Robinson, C. T., & Malard, F. (2018). Cryptic species as a window into the paradigm shift of the species concept. Molecular Ecology, 27(3), 613-635. https://doi.org/10.1111/mec.14486 Detailed Record Published Version Accepted Version
	Increase in multiple paternity across the reproductive lifespan in a sperm-storing, hermaphroditic freshwater snail Bürkli, A., & Jokela, J. (2017). Increase in multiple paternity across the reproductive lifespan in a sperm-storing, hermaphroditic freshwater snail. Molecular Ecology, 26(19), 5264-5278. https://doi.org/10.1111/mec.14200 Detailed Record Published Version Accepted Version
	Environmental DNA metabarcoding: transforming how we survey animal and plant communities Deiner, K., Bik, H. M., Mächler, E., Seymour, M., Lacoursière-Roussel, A., Altermatt, F., … Bernatchez, L. (2017). Environmental DNA metabarcoding: transforming how we survey animal and plant communities. Molecular Ecology, 26(21), 5872-5895. https://doi.org/10.1111/mec.14350 Detailed Record Published Version
	Cryptic lineages of a common alpine mayfly show strong life-history divergence Leys, M., Keller, I., Robinson, C. T., & Räsänen, K. (2017). Cryptic lineages of a common alpine mayfly show strong life-history divergence. Molecular Ecology, 26(6), 1670-1686. https://doi.org/10.1111/mec.14026 Detailed Record Published Version Accepted Version
	Long-term balancing selection on chromosomal variants associated with crypsis in a stick insect Lindtke, D., Lucek, K., Soria-Carrasco, V., Villoutreix, R., Farkas, T. E., Riesch, R., … Nosil, P. (2017). Long-term balancing selection on chromosomal variants associated with crypsis in a stick insect. Molecular Ecology, 26(22), 6189-6205. https://doi.org/10.1111/mec.14280 Detailed Record Published Version Accepted Version
	Adaptation despite gene flow? Low recombination helps Marques, D. A. (2017). Adaptation despite gene flow? Low recombination helps. Molecular Ecology, 26(17), 4361-4363. https://doi.org/10.1111/mec.14251 Detailed Record Published Version Accepted Version
	The genomic basis of eco-evolutionary dynamics Rodriguez-Verdugo, A., Buckley, J., & Stapley, J. (2017). The genomic basis of eco-evolutionary dynamics. Molecular Ecology, 26(6), 1456-1464. https://doi.org/10.1111/mec.14045 Detailed Record Published Version
	Transcriptome profiling of immune tissues reveals habitat-specific gene expression between lake and river sticklebacks Huang, Y., Chain, F. J. J., Panchal, M., Eizaguirre, C., Kalbe, M., Lenz, T. L., … Feulner, P. G. D. (2016). Transcriptome profiling of immune tissues reveals habitat-specific gene expression between lake and river sticklebacks. Molecular Ecology, 25(4), 943-958. https://doi.org/10.1111/mec.13520 Detailed Record Published Version