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Unraveling the riverine antibiotic resistome: the downstream fate of anthropogenic inputs
Lee, J., Ju, F., Maile-Moskowitz, A., Beck, K., Maccagnan, A., McArdell, C. S., … Bürgmann, H. (2021). Unraveling the riverine antibiotic resistome: the downstream fate of anthropogenic inputs. Water Research, 197, 117050 (12 pp.). https://doi.org/10.1016/j.watres.2021.117050
Bridging the holistic-reductionist divide in microbial ecology
Tecon, R., Mitri, S., Ciccarese, D., Or, D., van der Meer, J. R., & Johnson, D. R. (2019). Bridging the holistic-reductionist divide in microbial ecology. mSystems, 4(1), e00265-18 (5 pp.). https://doi.org/10.1128/mSystems.00265-18
Metagenomic characterization of biofilter microbial communities in a full-scale drinking water treatment plant
Oh, S., Hammes, F., & Liu, W. T. (2018). Metagenomic characterization of biofilter microbial communities in a full-scale drinking water treatment plant. Water Research, 128, 278-285. https://doi.org/10.1016/j.watres.2017.10.054
The ecologist's field guide to sequence-based identification of biodiversity
Creer, S., Deiner, K., Frey, S., Porazinska, D., Taberlet, P., Thomas, W. K., … Bik, H. M. (2016). The ecologist's field guide to sequence-based identification of biodiversity. Methods in Ecology and Evolution, 7, 1008-1018. https://doi.org/10.1111/2041-210X.12574
The activity level of a microbial community function can be predicted from its metatranscriptome
Helbling, D. E., Ackermann, M., Fenner, K., Kohler, H. P. E., & Johnson, D. R. (2012). The activity level of a microbial community function can be predicted from its metatranscriptome. ISME Journal, 6(4), 902-904. https://doi.org/10.1038/ismej.2011.158
Progress in the ecological genetics and biodiversity of freshwater bacteria
Logue, J. B., Bürgmann, H., & Robinson, C. T. (2008). Progress in the ecological genetics and biodiversity of freshwater bacteria. BioScience, 58(2), 103-113. https://doi.org/10.1641/B580205