Neutron inspection of sea-going cargo containers has been widely studied in the past 20 yr to non-intrusively detect terrorist threats, like explosives or Special Nuclear Materials (SNM), and illicit goods, like narcotics or smuggling materials. Fast 14 MeV neutrons are produced by a portable generator with the t(d, n)α fusion reaction, and tagged in both direction and time thanks to the alpha particle detection. This Associated Particle Technique (APT) allows focusing inspection on specific areas of interest in the containers, previously identified as containing suspicious items with X-ray radiographic scanners or radiation portal monitors. We describe the principle of APT for non-nuclear material identification, and for nuclear material detection, then we provide illustrations of the performances for 10 min inspections with significant quantities (kilograms) of explosives, illicit drugs, or SNM, in different cargo cover loads (e.g. metallic, organic, or ceramic matrices).