Understanding the reaction mechanism is critical yet challenging in heterogeneous catalysis. Reactive intermediates, e.g., radicals and ketenes, are short-lived and often evade detection. In this review, we summarize recent developments with operando photoelectron photoion coincidence (PEPICO) spectroscopy as a versatile tool capable of detecting elusive intermediates. PEPICO combines the advantages of mass spectrometry and the isomer-selectivity of threshold photoelectron spectroscopy. Recent applications of PEPICO in understanding catalyst synthesis and catalytic reaction mechanisms involving gaseous and surface-confined radical and ketene chemistry will be summarized.