Water drainage from porous media is a highly dynamic process often marked by rapid piston-like air invasion events at the front and other rapid interfacial reconfigurations. Liquid phase entrapped behind the moving front drains at significantly slower rates often via gravity driven flow through corners and crevices. This distribution of slowly draining residual water phase determines the plant available water and biological functioning of soils. The study aims to determine the conditions for the flow regime transition from piston-like invasion at a drainage front to slower corner dominated flow at the pore and sample scale. This transition was observed experimentally for sand and glass beads with fast X-ray tomography, revealing water fragmentation into clusters of full pores interconnected by water corner films. The observed liquid morphology at the transition from piston to corner flow was reproduced by a quasi-static pore network model and predicted by percolation theory. The amount of capillary-retained water at flow transition controlling the subsequent drainage dynamics could be reproduced by an idealized star shaped pore whose geometry is deduced from macroscopic properties of the porous medium. Predictions of water content thresholds at flow transitions were in agreement with other critical saturation values associated with cessation of solute diffusion and of internal drainage (at field capacity) highlighting the criticality of water phase continuity disruption for formation of relatively stable unsaturated conditions controlled by slow corner flow that support life in soil.