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JUNGFRAU detector for brighter x-ray sources: solutions for IT and data science challenges in macromolecular crystallography
Leonarski, F., Mozzanica, A., Brückner, M., Lopez-Cuenca, C., Redford, S., Sala, L., Babic, A., Billich, H., Bunk, O., Schmitt, B., & Wang, M. (2020). JUNGFRAU detector for brighter x-ray sources: solutions for IT and data science challenges in macromolecular crystallography. Structural Dynamics, 7(1), 014305 (13 pp.). https://doi.org/10.1063/1.5143480
X-ray fluorescence detection for serial macromolecular crystallography using a JUNGFRAU pixel detector
Martiel, I., Mozzanica, A., Opara, N. L., Panepucci, E., Leonarski, F., Redford, S., Mohacsi, I., Guzenko, V., Ozerov, D., Padeste, C., Schmitt, B., Pedrini, B., & Wang, M. (2020). X-ray fluorescence detection for serial macromolecular crystallography using a JUNGFRAU pixel detector. Journal of Synchrotron Radiation, 27, 329-339. https://doi.org/10.1107/S1600577519016758
Femtosecond-to-millisecond structural changes in a light-driven sodium pump
Skopintsev, P., Ehrenberg, D., Weinert, T., James, D., Kar, R. K., Johnson, P. J. M., Ozerov, D., Furrer, A., Martiel, I., Dworkowski, F., Nass, K., Knopp, G., Cirelli, C., Arrell, C., Gashi, D., Mous, S., Wranik, M., Gruhl, T., Kekilli, D., … Standfuss, J. (2020). Femtosecond-to-millisecond structural changes in a light-driven sodium pump. Nature. https://doi.org/10.1038/s41586-020-2307-8
<em>PtychoShelves</em>, a versatile high-level framework for high-performance analysis of ptychographic data
Wakonig, K., Stadler, H. C., Odstrčil, M., Tsai, E. H. R., Diaz, A., Holler, M., Usov, I., Raabe, J., Menzel, A., & Guizar-Sicairos, M. (2020). PtychoShelves, a versatile high-level framework for high-performance analysis of ptychographic data. Journal of Applied Crystallography, 53(2), 574-586. https://doi.org/10.1107/S1600576720001776
Structure-factor amplitude reconstruction from serial femtosecond crystallography of two-dimensional membrane-protein crystals
Casadei, C. M., Nass, K., Barty, A., Hunter, M. S., Padeste, C., Tsai, C. J., Boutet, S., Messerschmidt, M., Sala, L., Williams, G. J., Ozerov, D., Coleman, M., Li, X. D., Frank, M., & Pedrini, B. (2019). Structure-factor amplitude reconstruction from serial femtosecond crystallography of two-dimensional membrane-protein crystals. IUCrJ, 6, 34-45. https://doi.org/10.1107/S2052252518014641
Experimental station Bernina at SwissFEL: condensed matter physics on femtosecond time scales investigated by X-ray diffraction and spectroscopic methods
Ingold, G., Abela, R., Arrell, C., Beaud, P., Böhler, P., Cammarata, M., Deng, Y., Erny, C., Esposito, V., Flechsig, U., Follath, R., Hauri, C., Johnson, S., Juranic, P., Mancini, G. F., Mankowsky, R., Mozzanica, A., Oggenfuss, R. A., Patterson, B. D., … Lemke, H. T. (2019). Experimental station Bernina at SwissFEL: condensed matter physics on femtosecond time scales investigated by X-ray diffraction and spectroscopic methods. Journal of Synchrotron Radiation, 26(3), 874-886. https://doi.org/10.1107/S160057751900331X
Core-level nonlinear spectroscopy triggered by stochastic X-ray pulses
Kayser, Y., Milne, C., Juranić, P., Sala, L., Czapla-Masztafiak, J., Follath, R., Kavčič, M., Knopp, G., Rehanek, J., Błachucki, W., Delcey, M. G., Lundberg, M., Tyrała, K., Zhu, D., Alonso-Mori, R., Abela, R., Sá, J., & Szlachetko, J. (2019). Core-level nonlinear spectroscopy triggered by stochastic X-ray pulses. Nature Communications, 10(1), 4761 (10 pp.). https://doi.org/10.1038/s41467-019-12717-1
Proton uptake mechanism in bacteriorhodopsin captured by serial synchrotron crystallography
Weinert, T., Skopintsev, P., James, D., Dworkowski, F., Panepucci, E., Kekilli, D., Furrer, A., Brünle, S., Mous, S., Ozerov, D., Nogly, P., Wang, M., & Standfuss, J. (2019). Proton uptake mechanism in bacteriorhodopsin captured by serial synchrotron crystallography. Science, 365(6448), 61-65. https://doi.org/10.1126/science.aaw8634
Combination and QCD analysis of charm and beauty production cross-section measurements in deep inelastic <em>ep </em>scattering at HERA
Abramowicz, H., Abt, I., Adamczyk, L., Adamus, M., Aggarwal, R., Andreev, V., Antonelli, S., Aushev, V., Baghdasaryan, A., Begzsuren, K., Egli, S., Horisberger, R., Ozerov, D., & Zomer, F. (2018). Combination and QCD analysis of charm and beauty production cross-section measurements in deep inelastic ep scattering at HERA. The European Physical Journal C, 78(6), 473 (32 pp.). https://doi.org/10.1140/epjc/s10052-018-5848-3
Determination of electroweak parameters in polarised deep-inelastic scattering at HERA
Andreev, V., Baghdasaryan, A., Begzsuren, K., Belousov, A., Bolz, A., Boudry, V., Brandt, G., Brisson, V., Britzger, D., Buniatyan, A., Egli, S., Horisberger, R., Ozerov, D., & Zomer, F. (2018). Determination of electroweak parameters in polarised deep-inelastic scattering at HERA. The European Physical Journal C, 78(9), 777 (23 pp.). https://doi.org/10.1140/epjc/s10052-018-6236-8
Resolution extension by image summing in serial femtosecond crystallography of two-dimensional membrane-protein crystals
Casadei, C. M., Tsai, C. J., Barty, A., Hunter, M. S., Zatsepin, N. A., Padeste, C., Capitani, G., Benner, W. H., Boutet, S., Hau-Riege, S. P., Kupitz, C., Messerschmidt, M., Ogren, J. I., Pardini, T., Rothschild, K. J., Sala, L., Segelke, B., Williams, G. J., Evans, J. E., … Frank, M. (2018). Resolution extension by image summing in serial femtosecond crystallography of two-dimensional membrane-protein crystals. IUCrJ, 5(1), 103-117. https://doi.org/10.1107/S2052252517017043
Line shape analysis of the K<em>β</em> transition in muonic hydrogen
Covita, D. S., Anagnostopoulos, D. F., Fuhrmann, H., Gorke, H., Gotta, D., Gruber, A., Hirtl, A., Ishiwatari, T., Indelicato, P., Jensen, T. S., Le Bigot, E. O., Markushin, V. E., Nekipelov, M., Pomerantsev, V. N., Popov, V. P., dos Santos, J. M. F., Schmid, P., Simons, L. M., Theisen, M., … Zmeskal, J. (2018). Line shape analysis of the Kβ transition in muonic hydrogen. European Physical Journal D: Atomic, Molecular, Optical and Plasma Physics, 72(4), 72 (22 pp.). https://doi.org/10.1140/epjd/e2018-80593-1
Dynamics of the photoinduced insulator-to-metal transition in a nickelate film
Esposito, V., Rettig, L., Bothschafter, E. M., Deng, Y., Dornes, C., Huber, L., Huber, T., Ingold, G., Inubushi, Y., Katayama, T., Kawaguchi, T., Lemke, H., Ogawa, K., Owada, S., Radovic, M., Ramakrishnan, M., Ristic, Z., Scagnoli, V., Tanaka, Y., … Staub, U. (2018). Dynamics of the photoinduced insulator-to-metal transition in a nickelate film. Structural Dynamics, 5(6), 64501 (10 pp.). https://doi.org/10.1063/1.5063530
Fast and accurate data collection for macromolecular crystallography using the JUNGFRAU detector
Leonarski, F., Redford, S., Mozzanica, A., Lopez-Cuenca, C., Panepucci, E., Nass, K., Ozerov, D., Vera, L., Olieric, V., Buntschu, D., Schneider, R., Tinti, G., Froejdh, E., Diederichs, K., Bunk, O., Schmitt, B., & Wang, M. (2018). Fast and accurate data collection for macromolecular crystallography using the JUNGFRAU detector. Nature Methods, 15(10), 799-804. https://doi.org/10.1038/s41592-018-0143-7
Small-angle X-ray scattering tensor tomography: model of the three-dimensional reciprocal-space map, reconstruction algorithm and angular sampling requirements
Liebi, M., Georgiadis, M., Kohlbrecher, J., Holler, M., Raabe, J., Usov, I., Menzel, A., Schneider, P., Bunk, O., & Guizar-Sicairos, M. (2018). Small-angle X-ray scattering tensor tomography: model of the three-dimensional reciprocal-space map, reconstruction algorithm and angular sampling requirements. Acta Crystallographica Section A: Foundations and Advances, 74(1), 12-24. https://doi.org/10.1107/S205327331701614X
Retinal isomerization in bacteriorhodopsin captured by a femtosecond x-ray laser
Nogly, P., Weinert, T., James, D., Carbajo, S., Ozerov, D., Furrer, A., Gashi, D., Borin, V., Skopintsev, P., Jaeger, K., Nass, K., Båth, P., Bosman, R., Koglin, J., Seaberg, M., Lane, T., Kekilli, D., Brünle, S., Tanaka, T., … Standfuss, J. (2018). Retinal isomerization in bacteriorhodopsin captured by a femtosecond x-ray laser. Science, 361(6398), eaat0094 (7 pp.). https://doi.org/10.1126/science.aat0094
Nanocellulose fragmentation mechanisms and inversion of chirality from the single particle to the cholesteric phase
Nyström, G., Arcari, M., Adamcik, J., Usov, I., & Mezzenga, R. (2018). Nanocellulose fragmentation mechanisms and inversion of chirality from the single particle to the cholesteric phase. ACS Nano, 12(6), 5141-5148. https://doi.org/10.1021/acsnano.8b00512
SwissFEL – beam synchronous data acquisition – the first year
Ebner, S. G., Brands, H., Kalantari, B., Kapeller, R., Märki, F., Sala, L., & Zellweger, C. (2017). SwissFEL – beam synchronous data acquisition – the first year. In V. R. W. Schaa, I. Costa, D. Fernández, & O. Matilla (Eds.), Proceedings of the 16th international conference on accelerator and large experimental control systems (pp. 276-279). https://doi.org/10.18429/JACoW-ICALEPCS2017-TUCPA06
THz streak camera method for synchronous arrival time measurement of two-color hard X-ray FEL pulses
Gorgisyan, I., Ischebeck, R., Erny, C., Dax, A., Patthey, L., Pradervand, C., Sala, L., Milne, C., Lemke, H. T., Hauri, C. P., Katayama, T., Owada, S., Yabashi, M., Togashi, T., Abela, R., Rivkin, L., & Juranić, P. (2017). THz streak camera method for synchronous arrival time measurement of two-color hard X-ray FEL pulses. Optics Express, 25(3), 2080-2091. https://doi.org/10.1364/OE.25.002080
Transformation cycle between the spherically symmetric correlation function, projected correlation function and differential cross section as implemented in <em>SASfit</em>
Kohlbrecher, J., & Studer, A. (2017). Transformation cycle between the spherically symmetric correlation function, projected correlation function and differential cross section as implemented in SASfit. Journal of Applied Crystallography, 50(5), 1395-1403. https://doi.org/10.1107/S1600576717011979
 

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