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Long-wavelength native-SAD phasing: opportunities and challenges
Basu, S., Olieric, V., Leonarski, F., Matsugaki, N., Kawano, Y., Takashi, T., … Wang, M. (2019). Long-wavelength native-SAD phasing: opportunities and challenges. IUCrJ, 6(3), 1-14. https://doi.org/10.1107/S2052252519002756
Single crystal time-lapse measurement using ultrasonic acoustic levitation
Tomizaki, T., Shinoda, A., & Tsujino, S. (2019). Single crystal time-lapse measurement using ultrasonic acoustic levitation. In S. Gwo, D. J. Huang, & D. H. Wei (Eds.), AIP conference proceedings: Vol. 2054. Proceedings of the 13th international conference on synchrotron radiation instrumentation – SRI2018. https://doi.org/10.1063/1.5084703
On-demand droplet loading of ultrasonic acoustic levitator and its application for protein crystallography experiments
Tsujino, S., Shinoda, A., & Tomizaki, T. (2019). On-demand droplet loading of ultrasonic acoustic levitator and its application for protein crystallography experiments. Applied Physics Letters, 114(21), 213702 (5 pp.). https://doi.org/10.1063/1.5095574
Oscillation resonances and anisotropic damping of the motion of acoustically levitated droplets in single-axis acoustic levitators
Tsujino, S., Sato, Y., Takeda, Y., & Tomizaki, T. (2019). Oscillation resonances and anisotropic damping of the motion of acoustically levitated droplets in single-axis acoustic levitators. Applied Physics Letters, 115, 053702 (5 pp.). https://doi.org/10.1063/1.5112109
Structural basis for blue-green light harvesting and energy dissipation in diatoms
Wang, W., Yu, L. J., Xu, C., Tomizaki, T., Zhao, S., Umena, Y., … Shen, J. R. (2019). Structural basis for blue-green light harvesting and energy dissipation in diatoms. Science, 363(6427), eaav0365 (8 pp.). https://doi.org/10.1126/science.aav0365
High-resolution neutron and X-ray diffraction room-temperature studies of an H-FABP-oleic acid complex: study of the internal water cluster and ligand binding by a transferred multipolar electron-density distribution
Howard, E. I., Guillot, B., Blakeley, M. P., Haertlein, M., Moulin, M., Mitschler, A., … Podjarny, A. (2016). High-resolution neutron and X-ray diffraction room-temperature studies of an H-FABP-oleic acid complex: study of the internal water cluster and ligand binding by a transferred multipolar electron-density distribution. IUCrJ, 3, 115-126. https://doi.org/10.1107/S2052252515024161
Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature
Tsujino, S., & Tomizaki, T. (2016). Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature. Scientific Reports, 6, 25558 (9 pp.). https://doi.org/10.1038/srep25558
Three-dimensional mass density mapping of cellular ultrastructure by ptychographic X-ray nanotomography
Diaz, A., Malkova, B., Holler, M., Guizar-Sicairos, M., Lima, E., Panneels, V., … Menzel, A. (2015). Three-dimensional mass density mapping of cellular ultrastructure by ptychographic X-ray nanotomography. Journal of Structural Biology, 192(3), 461-469. https://doi.org/10.1016/j.jsb.2015.10.008
D3, the new diffractometer for the macromolecular crystallography beamlines of the Swiss Light Source
Fuchs, M. R., Pradervand, C., Thominet, V., Schneider, R., Panepucci, E., Grunder, M., … Wang, M. (2014). D3, the new diffractometer for the macromolecular crystallography beamlines of the Swiss Light Source. Journal of Synchrotron Radiation, 21(2), 340-351. https://doi.org/10.1107/S160057751400006X
X-ray structure of the mouse serotonin 5-HT3 receptor
Hassaine, G., Deluz, C., Grasso, L., Wyss, R., Tol, M. B., Hovius, R., … Nury, H. (2014). X-ray structure of the mouse serotonin 5-HT3 receptor. Nature, 512(7514), 276-281. https://doi.org/10.1038/nature13552
SLS crystallization platform at beamline X06DA-A fully automated pipeline enabling in situ X-ray diffraction screening
Bingel-Erlenmeyer, R., Olieric, V., Grimshaw, J. P. A., Gabadinho, J., Wang, X., Ebner, S. G., … Schulze-Briese, C. (2011). SLS crystallization platform at beamline X06DA-A fully automated pipeline enabling in situ X-ray diffraction screening. Crystal Growth and Design, 11(4), 916-923. https://doi.org/10.1021/cg101375j
Industrial use of the SLS-MX beamlines
Diez, J., Wang, M., Pohl, E., Tomizaki, T., Bertrand, A., Chen, Q., … Schulze-Briese, C. (2007). Industrial use of the SLS-MX beamlines. Synchrotron Radiation News, 20(4), 19-22. https://doi.org/10.1080/08940880701510787
The PILATUS 1M detector
Broennimann, C., Eikenberry, E. F., Henrich, B., Horisberger, R., Huelsen, G., Pohl, E., … Wagner, A. (2006). The PILATUS 1M detector. Journal of Synchrotron Radiation, 13(2), 120-130. https://doi.org/10.1107/S0909049505038665
Beam-size effects in radiation damage in insulin and thaumatin crystals
Schulze-Briese, C., Wagner, A., Tomizaki, T., & Oetiker, M. (2005). Beam-size effects in radiation damage in insulin and thaumatin crystals. Journal of Synchrotron Radiation, 12(3), 261-267. https://doi.org/10.1107/S0909049505003298
High-resolution structures of human aldose reductase holoenzyme in complex with stereoisomers of the potent inhibitor fidarestat: stereospecific interaction between the enzyme and a cyclic imide type inhibitor
El-Kabbani, O., Darmanin, C., Oka, M., Schulze-Briese, C., Tomizaki, T., Hazemann, I., … Podjarny, A. (2004). High-resolution structures of human aldose reductase holoenzyme in complex with stereoisomers of the potent inhibitor fidarestat: stereospecific interaction between the enzyme and a cyclic imide type inhibitor. Journal of Medicinal Chemistry, 47(18), 4530-4537. https://doi.org/10.1021/jm0497794
Ultrahigh resolution drug design. II. Atomic resolution structures of human aldose reductase holoenzyme complexed with Fidarestat and Minalrestat: implications for the binding of cyclic imide inhibitors
El-Kabbani, O., Darmanin, C., Schneider, T. R., Hazemann, I., Ruiz, F., Oka, M., … Podjarny, A. (2004). Ultrahigh resolution drug design. II. Atomic resolution structures of human aldose reductase holoenzyme complexed with Fidarestat and Minalrestat: implications for the binding of cyclic imide inhibitors. Proteins, 55(4), 805-813. https://doi.org/10.1002/prot.20001
Development of single photon counting detectors at the Swiss Light Source
Schmitt, B., Brönnimann, C., Eikenberry, E. F., Hülsen, G., Toyokawa, H., Horisberger, R., … Tomizaki, T. (2004). Development of single photon counting detectors at the Swiss Light Source. Nuclear Instruments and Methods in Physics Research, Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 518(1-2), 436-439. https://doi.org/10.1016/j.nima.2003.11.051
The molecular basis of vitamin E retention: structure of human α-tocopherol transfer protein
Meier, R., Tomizaki, T., Schulze-Briese, C., Baumann, U., & Stocker, A. (2003). The molecular basis of vitamin E retention: structure of human α-tocopherol transfer protein. Journal of Molecular Biology, 331(3), 725-734. https://doi.org/10.1016/S0022-2836(03)00724-1
Crystal structure of the human supernatant protein factor
Stocker, A., Tomizaki, T., Schulze-Briese, C., & Baumann, U. (2002). Crystal structure of the human supernatant protein factor. Structure, 10(11), 1533-1540. https://doi.org/10.1016/S0969-2126(02)00884-5