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Triazolo-peptidomimetics: novel radiolabeled minigastrin analogs for improved tumor targeting
Grob, N. M., Häussinger, D., Deupi, X., Schibli, R., Behe, M., & Mindt, T. L. (2020). Triazolo-peptidomimetics: novel radiolabeled minigastrin analogs for improved tumor targeting. Journal of Medicinal Chemistry, 63(9), 4484-4495. https://doi.org/10.1021/acs.jmedchem.9b01936
Femtosecond-to-millisecond structural changes in a light-driven sodium pump
Skopintsev, P., Ehrenberg, D., Weinert, T., James, D., Kar, R. K., Johnson, P. J. M., … Standfuss, J. (2020). Femtosecond-to-millisecond structural changes in a light-driven sodium pump. Nature. https://doi.org/10.1038/s41586-020-2307-8
The two-photon reversible reaction of the bistable jumping spider rhodopsin-1
Ehrenberg, D., Varma, N., Deupi, X., Koyanagi, M., Terakita, A., Schertler, G. F. X., … Lesca, E. (2019). The two-photon reversible reaction of the bistable jumping spider rhodopsin-1. Biophysical Journal, 116(7), 1248-1258. https://doi.org/10.1016/j.bpj.2019.02.025
Arrestin-1 engineering facilitates complex stabilization with native rhodopsin
Haider, R. S., Wilhelm, F., Rizk, A., Mutt, E., Deupi, X., Peterhans, C., … Ostermaier, M. K. (2019). Arrestin-1 engineering facilitates complex stabilization with native rhodopsin. Scientific Reports, 9(1), 439 (13 pp.). https://doi.org/10.1038/s41598-018-36881-4
Distinct G protein-coupled receptor phosphorylation motifs modulate arrestin affinity and activation and global conformation
Mayer, D., Damberger, F. F., Samarasimhareddy, M., Feldmueller, M., Vuckovic, Z., Flock, T., … Veprintsev, D. B. (2019). Distinct G protein-coupled receptor phosphorylation motifs modulate arrestin affinity and activation and global conformation. Nature Communications, 10, 1261 (14 pp.). https://doi.org/10.1038/s41467-019-09204-y
An online resource for GPCR structure determination and analysis
Munk, C., Mutt, E., Isberg, V., Nikolajsen, L. F., Bibbe, J. M., Flock, T., … Gloriam, D. E. (2019). An online resource for GPCR structure determination and analysis. Nature Methods, 16(2), 151-162. https://doi.org/10.1038/s41592-018-0302-x
The counterion–retinylidene Schiff base interaction of an invertebrate rhodopsin rearranges upon light activation
Nagata, T., Koyanagi, M., Tsukamoto, H., Mutt, E., Schertler, G. F. X., Deupi, X., & Terakita, A. (2019). The counterion–retinylidene Schiff base interaction of an invertebrate rhodopsin rearranges upon light activation. Communications Biology, 2, 180 (9 pp.). https://doi.org/10.1038/s42003-019-0409-3
Elucidating the structure−activity relationship of the pentaglutamic acid sequence of minigastrin with cholecystokinin receptor subtype 2
Ritler, A., Shoshan, M. S., Deupi, X., Wilhelm, P., Schibli, R., Wennemers, H., & Béhé, M. (2019). Elucidating the structure−activity relationship of the pentaglutamic acid sequence of minigastrin with cholecystokinin receptor subtype 2. Bioconjugate Chemistry, 30(3), 657-666. https://doi.org/10.1021/acs.bioconjchem.8b00849
Cryo-EM structure of the rhodopsin-Gαi-βγ complex reveals binding of the rhodopsin C-terminal tail to the gβ subunit
Tsai, C. J., Marino, J., Adaixo, R., Pamula, F., Muehle, J., Maeda, S., … Schertler, G. (2019). Cryo-EM structure of the rhodopsin-Gαi-βγ complex reveals binding of the rhodopsin C-terminal tail to the gβ subunit. eLife, 8, e46041 (19 pp.). https://doi.org/10.7554/eLife.46041
Crystal structure of jumping spider rhodopsin-1 as a light sensitive GPCR
Varma, N., Mutt, E., Mühle, J., Panneels, V., Terakita, A., Deupi, X., … Lesca, E. (2019). Crystal structure of jumping spider rhodopsin-1 as a light sensitive GPCR. Proceedings of the National Academy of Sciences of the United States of America PNAS, 116(29), 14574-14556. https://doi.org/10.1073/pnas.1902192116
Convergent evolution of tertiary structure in rhodopsin visual proteins from vertebrates and box jellyfish
Gerrard, E., Mutt, E., Nagata, T., Koyanagi, M., Flock, T., Lesca, E., … Lucas, R. J. (2018). Convergent evolution of tertiary structure in rhodopsin visual proteins from vertebrates and box jellyfish. Proceedings of the National Academy of Sciences of the United States of America PNAS, 115(24), 6201-6206. https://doi.org/10.1073/pnas.1721333115
GPCR-SAS: a web application for statistical analyses on G protein-coupled receptors sequences
Gómez Tamayo, J. C., Olivella, M., Ríos, S., Hoogstraat, M., Gonzalez, A., Mayol, E., … Cordomí, A. (2018). GPCR-SAS: a web application for statistical analyses on G protein-coupled receptors sequences. PLoS One, 13(7), e0199843 (14 pp.). https://doi.org/10.1371/journal.pone.0199843
Crystal structure of rhodopsin in complex with a mini-G<sub>o</sub> sheds light on the principles of G protein selectivity
Tsai, C. J., Pamula, F., Nehmé, R., Mühle, J., Weinert, T., Flock, T., … Schertler, G. F. X. (2018). Crystal structure of rhodopsin in complex with a mini-Go sheds light on the principles of G protein selectivity. Science Advances, 4(9), aat7052 (9 pp.). https://doi.org/10.1126/sciadv.aat7052
The DRF motif of CXCR6 as chemokine receptor adaptation to adhesion
Koenen, A., Babendreyer, A., Schumacher, J., Pasqualon, T., Schwarz, N., Seifert, A., … Dreymueller, D. (2017). The DRF motif of CXCR6 as chemokine receptor adaptation to adhesion. PLoS One, 12(3), e0173486 (22 pp.). https://doi.org/10.1371/journal.pone.0173486
SAS-6 engineering reveals interdependence between cartwheel and microtubules in determining centriole architecture
Hilbert, M., Noga, A., Frey, D., Hamel, V., Guichard, P., Kraatz, S. H. W., … Steinmetz, M. O. (2016). SAS-6 engineering reveals interdependence between cartwheel and microtubules in determining centriole architecture. Nature Cell Biology, 18(4), 393-403. https://doi.org/10.1038/ncb3329
Backbone NMR reveals allosteric signal transduction networks in the β<sub>1</sub>-adrenergic receptor
Isogai, S., Deupi, X., Opitz, C., Heydenreich, F. M., Tsai, C. J., Brueckner, F., … Grzesiek, S. (2016). Backbone NMR reveals allosteric signal transduction networks in the β1-adrenergic receptor. Nature, 530(7589), 237-241. https://doi.org/10.1038/nature16577
Structural role of the T94I rhodopsin mutation in congenital stationary night blindness
Singhal, A., Guo, Y., Matkovic, M., Schertler, G., Deupi, X., Yan, E. C. Y., & Standfuss, J. (2016). Structural role of the T94I rhodopsin mutation in congenital stationary night blindness. EMBO Reports, 17(10), 1431-1440. https://doi.org/10.15252/embr.201642671
Diverse activation pathways in class A GPCRs converge near the G-protein-coupling region
Venkatakrishnan, A. J., Deupi, X., Lebon, G., Heydenreich, F. M., Flock, T., Miljus, T., … Babu, M. M. (2016). Diverse activation pathways in class A GPCRs converge near the G-protein-coupling region. Nature, 536(7617), 484-487. https://doi.org/10.1038/nature19107
Conformational activation of visual rhodopsin in native disc membranes
Malmerberg, E., Bovee-Geurts, P. H. M., Katona, G., Deupi, X., Arnlund, D., Wickstrand, C., … Neutze, R. (2015). Conformational activation of visual rhodopsin in native disc membranes. Science Signaling, 8(367), ra26 (9 pp.). https://doi.org/10.1126/scisignal.2005646
TMalphaDB and TMbetaDB: web servers to study the structural role of sequence motifs in α-helix and β-barrel domains of membrane proteins
Perea, M., Lugtenburg, I., Mayol, E., Cordomí, A., Deupí, X., Pardo, L., & Olivella, M. (2015). TMalphaDB and TMbetaDB: web servers to study the structural role of sequence motifs in α-helix and β-barrel domains of membrane proteins. BMC Bioinformatics, 16, 266 (6 pp.). https://doi.org/10.1186/s12859-015-0699-5