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Estimating genomic diversity and population differentiation – an empirical comparison of microsatellite and SNP variation in <I>Arabidopsis halleri</I>
Fischer, M. C., Rellstab, C., Leuzinger, M., Roumet, M., Gugerli, F., Shimizu, K. K., … Widmer, A. (2017). Estimating genomic diversity and population differentiation – an empirical comparison of microsatellite and SNP variation in Arabidopsis halleri. BMC Genomics, 18, 69 (15 pp.). https://doi.org/10.1186/s12864-016-3459-7
Local adaptation (mostly) remains local: reassessing environmental associations of climate-related candidate SNPs in <I>Arabidopsis halleri</I>
Rellstab, C., Fischer, M. C., Zoller, S., Graf, R., Tedder, A., Shimizu, K. K., … Gugerli, F. (2017). Local adaptation (mostly) remains local: reassessing environmental associations of climate-related candidate SNPs in Arabidopsis halleri. Heredity, 118(2), 193-201. https://doi.org/10.1038/hdy.2016.82
A practical guide to environmental association analysis in landscape genomics
Rellstab, C., Gugerli, F., Eckert, A. J., Hancock, A. M., & Holderegger, R. (2015). A practical guide to environmental association analysis in landscape genomics. Molecular Ecology, 24(17), 4348-4370. https://doi.org/10.1111/mec.13322
Efficient detection of novel nuclear markers for Brassicaceae by transcriptome sequencing
Stockenhuber, R., Zoller, S., Shimizu-Inatsugi, R., Gugerli, F., Shimizu, K. K., Widmer, A., & Fischer, M. C. (2015). Efficient detection of novel nuclear markers for Brassicaceae by transcriptome sequencing. PLoS One, 10(6), e0128181 (19 pp.). https://doi.org/10.1371/journal.pone.0128181
Validation of outlier loci through replication in independent data sets: a test on <i>Arabis alpina</i>
Buehler, D., Holderegger, R., Brodbeck, S., Schnyder, E., & Gugerli, F. (2014). Validation of outlier loci through replication in independent data sets: a test on Arabis alpina. Ecology and Evolution, 4(22), 4296-4306. https://doi.org/10.1002/ece3.1300
Ten years of landscape genetics
Manel, S., & Holderegger, R. (2013). Ten years of landscape genetics. Trends in Ecology and Evolution, 28(10), 614-621. https://doi.org/10.1016/j.tree.2013.05.012
Validation of SNP allele frequencies determined by pooled next-generation sequencing in natural populations of a non-model plant species
Rellstab, C., Zoller, S., Tedder, A., Gugerli, F., & Fischer, M. C. (2013). Validation of SNP allele frequencies determined by pooled next-generation sequencing in natural populations of a non-model plant species. PLoS One, 8(11), e80422 (10 pp.). https://doi.org/10.1371/journal.pone.0080422
Are adaptive loci transferable across genomes of related species? Outlier and environmental association analyses in Alpine Brassicaceae species
Zulliger, D., Schnyder, E., & Gugerli, F. (2013). Are adaptive loci transferable across genomes of related species? Outlier and environmental association analyses in Alpine Brassicaceae species. Molecular Ecology, 22(6), 1626-1639. https://doi.org/10.1111/mec.12199
Forecasting changes in population genetic structure of alpine plants in response to global warming
Jay, F., Manel, S., Alvarez, N., Durand, E. Y., Thuiller, W., Holderegger, R., … François, O. (2012). Forecasting changes in population genetic structure of alpine plants in response to global warming. Molecular Ecology, 21(10), 2354-2368. https://doi.org/10.1111/j.1365-294X.2012.05541.x